B1LY23 (B1LY23_METRJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393
EC=1.15.1.1 RuleBase RU000393

Gene names

Ordered Locus Names:

Mrad2831_3819 EMBL ACB25794.1

Organism

Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) [Complete proteome] [HAMAP] EMBL ACB25794.1

Taxonomic identifier

426355 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium › Methylobacterium radiotolerans

Protein attributes

Sequence length	179 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393
Cofactor	Binds 1 copper ion per subunit By similarity. RuleBase RU000393 Binds 1 zinc ion per subunit By similarity. RuleBase RU000393
Sequence similarities	Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Ontologies

Keywords
Domain	Signal EMBL ACB25794.1
Ligand	Copper RuleBase RU000393 Metal-binding RuleBase RU000393 Zinc RuleBase RU000393
Molecular function	Oxidoreductase RuleBase RU000393
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 22	22	Potential EMBL ACB25794.1
	Chain	23 – 179	157	Potential		PRO_5000318374

Sequences

	Sequence		Length	Mass (Da)
	B1LY23 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 21C6EBD668D9E780	FASTA	179	18,316
	10 20 30 40 50 60 MTRTLPLLAL LGTAAAGGAL AQEPPKEAAK PAETYTAPIK NAKGDPIGTL AIRDGANTLV 70 80 90 100 110 120 LRVTIQPGGL PPGWHGMHFH AVGDCSDPKF MNSKAHVNHD QSKHGLLNAE GPDEGDLPNL 130 140 150 160 170 YAAQDGSANA EVSSETPLNG EGGLKDGDGA ALIIHANEDD HNTQPIGGAG DRIACGVIK

References

[1]

"Complete sequence of chromosome of Methylobacterium radiotolerans JCM 2831." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Mikhailova N., Marx C.J., Richardson P. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27329 / DSM 1819 / JCM 2831.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001001 Genomic DNA. Translation: ACB25794.1.
RefSeq	YP_001756477.1. NC_010505.1.
3D structure databases
ProteinModelPortal	B1LY23.
ModBase	Search...
Protein-protein interaction databases
STRING	426355.Mrad2831_3819.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACB25794; ACB25794; Mrad2831_3819.
GeneID	6139873.
KEGG	mrd:Mrad2831_3819.
PATRIC	22576064. VBIMetRad70578_3906.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2032.
HOGENOM	HOG000263448.
KO	K04565.
OMA	EDTENAM.
ProtClustDB	CLSK979885.
Enzyme and pathway databases
BioCyc	MRAD426355:GJB5-3863-MONOMER.
Family and domain databases
Gene3D	2.60.40.200. 1 hit.
InterPro	IPR024136. SOD_Cu/Zn. IPR024134. SOD_Cu/Zn_/chaperones. IPR018152. SOD_Cu/Zn_BS. IPR001424. SOD_Cu_Zn_dom. [Graphical view]
PANTHER	PTHR10003. PTHR10003. 1 hit. PTHR10003:SF11. PTHR10003:SF11. 1 hit.
Pfam	PF00080. Sod_Cu. 1 hit. [Graphical view]
SUPFAM	SSF49329. SOD_Cu_Zn. 1 hit.
PROSITE	PS00087. SOD_CU_ZN_1. 1 hit. PS00332. SOD_CU_ZN_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1LY23_METRJ

Accession

Primary (citable) accession number: B1LY23

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	May 1, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)