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B1LW17 (B1LW17_METRJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length572 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B1LW17 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 31AC2A457B9B5BA2

FASTA57263,761
        10         20         30         40         50         60 
MNEFAHLLDR LAYEPRRNAK LRMLQDYFAR TPDPERGYAL GAMTGTLSFR EAKPALIRGL 

        70         80         90        100        110        120 
VEERIDPVLF RLSHNYVGDL AETTALIWPG PTEAPREPGP GHNNPPPHVP TLAEVVETLA 

       130        140        150        160        170        180 
TIPKRELPRH LADWLDALDE TGRWALLKLV TGNLRVGVSA RLAKTAVGAL GGHDADAVEE 

       190        200        210        220        230        240 
VWHGLTPPFE TLFAWVEGRA ERPETLNPAP FRPPMLSHPI EEEADLEKLE AEAFSAEWKW 

       250        260        270        280        290        300 
DGIRVQLVGG LDRAGQQVGK VYSRTGEDIT GAFPDLAEAI TFAGALDGEL LILRERRVQS 

       310        320        330        340        350        360 
FNVLQQRLNR KAVTGKLLEE FPAHVRAYDL LTLEGDDLRG EPFATRRQKL EALVTRLDHA 

       370        380        390        400        410        420 
RIDISPLVPF ADWEALAAAR ADPASVGAGA DADAIEGVML KRLNSPYLPG RPKGPWWKWK 

       430        440        450        460        470        480 
REPHIVDAVM MYAQRGHGKR SSFYSDYTFG VWREAPEGGD ELVPVGKAYH GFTDAELAKL 

       490        500        510        520        530        540 
DRYVRNNTTK RFGPVREVAH GREAGLVLEI AFEGVQRSTR HKSGVAMRFP RVSRIRWDKP 

       550        560        570 
PAEADRIDVL ERILARGERE IAPGATLMEK TA 

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References

[1]"Complete sequence of chromosome of Methylobacterium radiotolerans JCM 2831."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Marx C.J., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27329 / DSM 1819 / JCM 2831.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001001 Genomic DNA. Translation: ACB25667.1.
RefSeqYP_001756350.1. NC_010505.1.

3D structure databases

ProteinModelPortalB1LW17.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING426355.Mrad2831_3691.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB25667; ACB25667; Mrad2831_3691.
GeneID6139744.
KEGGmrd:Mrad2831_3691.
PATRIC22575794. VBIMetRad70578_3772.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMARVWLWSR.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycMRAD426355:GJB5-3734-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1LW17_METRJ
AccessionPrimary (citable) accession number: B1LW17
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: May 14, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)