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B1LW17

- B1LW17_METRJ

UniProt

B1LW17 - B1LW17_METRJ

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Mrad2831_3691
Organism
Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMRAD426355:GJB5-3734-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mrad2831_3691Imported
OrganismiMethylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)Imported
Taxonomic identifieri426355 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesMethylobacteriaceaeMethylobacterium
ProteomesiUP000006589: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi426355.Mrad2831_3691.

Structurei

3D structure databases

ProteinModelPortaliB1LW17.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiRVWLWSR.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1LW17-1 [UniParc]FASTAAdd to Basket

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MNEFAHLLDR LAYEPRRNAK LRMLQDYFAR TPDPERGYAL GAMTGTLSFR    50
EAKPALIRGL VEERIDPVLF RLSHNYVGDL AETTALIWPG PTEAPREPGP 100
GHNNPPPHVP TLAEVVETLA TIPKRELPRH LADWLDALDE TGRWALLKLV 150
TGNLRVGVSA RLAKTAVGAL GGHDADAVEE VWHGLTPPFE TLFAWVEGRA 200
ERPETLNPAP FRPPMLSHPI EEEADLEKLE AEAFSAEWKW DGIRVQLVGG 250
LDRAGQQVGK VYSRTGEDIT GAFPDLAEAI TFAGALDGEL LILRERRVQS 300
FNVLQQRLNR KAVTGKLLEE FPAHVRAYDL LTLEGDDLRG EPFATRRQKL 350
EALVTRLDHA RIDISPLVPF ADWEALAAAR ADPASVGAGA DADAIEGVML 400
KRLNSPYLPG RPKGPWWKWK REPHIVDAVM MYAQRGHGKR SSFYSDYTFG 450
VWREAPEGGD ELVPVGKAYH GFTDAELAKL DRYVRNNTTK RFGPVREVAH 500
GREAGLVLEI AFEGVQRSTR HKSGVAMRFP RVSRIRWDKP PAEADRIDVL 550
ERILARGERE IAPGATLMEK TA 572
Length:572
Mass (Da):63,761
Last modified:April 29, 2008 - v1
Checksum:i31AC2A457B9B5BA2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001001 Genomic DNA. Translation: ACB25667.1.
RefSeqiYP_001756350.1. NC_010505.1.

Genome annotation databases

EnsemblBacteriaiACB25667; ACB25667; Mrad2831_3691.
GeneIDi6139744.
KEGGimrd:Mrad2831_3691.
PATRICi22575794. VBIMetRad70578_3772.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001001 Genomic DNA. Translation: ACB25667.1 .
RefSeqi YP_001756350.1. NC_010505.1.

3D structure databases

ProteinModelPortali B1LW17.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 426355.Mrad2831_3691.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACB25667 ; ACB25667 ; Mrad2831_3691 .
GeneIDi 6139744.
KEGGi mrd:Mrad2831_3691.
PATRICi 22575794. VBIMetRad70578_3772.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi RVWLWSR.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci MRAD426355:GJB5-3734-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Methylobacterium radiotolerans JCM 2831."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L.
    , Kyrpides N., Mikhailova N., Marx C.J., Richardson P.
    Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27329 / DSM 1819 / JCM 2831.

Entry informationi

Entry nameiB1LW17_METRJ
AccessioniPrimary (citable) accession number: B1LW17
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: May 14, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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