B1LW17 (B1LW17_METRJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ACB25667.1

Gene names

Ordered Locus Names:

Mrad2831_3691 EMBL ACB25667.1

Organism

Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) [Complete proteome] [HAMAP] EMBL ACB25667.1

Taxonomic identifier

426355 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium › Methylobacterium radiotolerans

Protein attributes

Sequence length	572 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACB25667.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1LW17 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 31AC2A457B9B5BA2	FASTA	572	63,761
	10 20 30 40 50 60 MNEFAHLLDR LAYEPRRNAK LRMLQDYFAR TPDPERGYAL GAMTGTLSFR EAKPALIRGL 70 80 90 100 110 120 VEERIDPVLF RLSHNYVGDL AETTALIWPG PTEAPREPGP GHNNPPPHVP TLAEVVETLA 130 140 150 160 170 180 TIPKRELPRH LADWLDALDE TGRWALLKLV TGNLRVGVSA RLAKTAVGAL GGHDADAVEE 190 200 210 220 230 240 VWHGLTPPFE TLFAWVEGRA ERPETLNPAP FRPPMLSHPI EEEADLEKLE AEAFSAEWKW 250 260 270 280 290 300 DGIRVQLVGG LDRAGQQVGK VYSRTGEDIT GAFPDLAEAI TFAGALDGEL LILRERRVQS 310 320 330 340 350 360 FNVLQQRLNR KAVTGKLLEE FPAHVRAYDL LTLEGDDLRG EPFATRRQKL EALVTRLDHA 370 380 390 400 410 420 RIDISPLVPF ADWEALAAAR ADPASVGAGA DADAIEGVML KRLNSPYLPG RPKGPWWKWK 430 440 450 460 470 480 REPHIVDAVM MYAQRGHGKR SSFYSDYTFG VWREAPEGGD ELVPVGKAYH GFTDAELAKL 490 500 510 520 530 540 DRYVRNNTTK RFGPVREVAH GREAGLVLEI AFEGVQRSTR HKSGVAMRFP RVSRIRWDKP 550 560 570 PAEADRIDVL ERILARGERE IAPGATLMEK TA

References

[1]

"Complete sequence of chromosome of Methylobacterium radiotolerans JCM 2831." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Mikhailova N., Marx C.J., Richardson P. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27329 / DSM 1819 / JCM 2831.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001001 Genomic DNA. Translation: ACB25667.1.
RefSeq	YP_001756350.1. NC_010505.1.
3D structure databases
ProteinModelPortal	B1LW17.
ModBase	Search...
Protein-protein interaction databases
STRING	426355.Mrad2831_3691.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACB25667; ACB25667; Mrad2831_3691.
GeneID	6139744.
KEGG	mrd:Mrad2831_3691.
PATRIC	22575794. VBIMetRad70578_3772.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000036007.
KO	K01971.
OMA	AYDLLEW.
Enzyme and pathway databases
BioCyc	MRAD426355:GJB5-3734-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1LW17_METRJ

Accession

Primary (citable) accession number: B1LW17

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	May 1, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)