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B1LW17

- B1LW17_METRJ

UniProt

B1LW17 - B1LW17_METRJ

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mrad2831_3691

Organism
Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (29 Apr 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMRAD426355:GJB5-3734-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Mrad2831_3691Imported
    OrganismiMethylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)Imported
    Taxonomic identifieri426355 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesMethylobacteriaceaeMethylobacterium
    ProteomesiUP000006589: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi426355.Mrad2831_3691.

    Structurei

    3D structure databases

    ProteinModelPortaliB1LW17.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiRVWLWSR.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B1LW17-1 [UniParc]FASTAAdd to Basket

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    MNEFAHLLDR LAYEPRRNAK LRMLQDYFAR TPDPERGYAL GAMTGTLSFR    50
    EAKPALIRGL VEERIDPVLF RLSHNYVGDL AETTALIWPG PTEAPREPGP 100
    GHNNPPPHVP TLAEVVETLA TIPKRELPRH LADWLDALDE TGRWALLKLV 150
    TGNLRVGVSA RLAKTAVGAL GGHDADAVEE VWHGLTPPFE TLFAWVEGRA 200
    ERPETLNPAP FRPPMLSHPI EEEADLEKLE AEAFSAEWKW DGIRVQLVGG 250
    LDRAGQQVGK VYSRTGEDIT GAFPDLAEAI TFAGALDGEL LILRERRVQS 300
    FNVLQQRLNR KAVTGKLLEE FPAHVRAYDL LTLEGDDLRG EPFATRRQKL 350
    EALVTRLDHA RIDISPLVPF ADWEALAAAR ADPASVGAGA DADAIEGVML 400
    KRLNSPYLPG RPKGPWWKWK REPHIVDAVM MYAQRGHGKR SSFYSDYTFG 450
    VWREAPEGGD ELVPVGKAYH GFTDAELAKL DRYVRNNTTK RFGPVREVAH 500
    GREAGLVLEI AFEGVQRSTR HKSGVAMRFP RVSRIRWDKP PAEADRIDVL 550
    ERILARGERE IAPGATLMEK TA 572
    Length:572
    Mass (Da):63,761
    Last modified:April 29, 2008 - v1
    Checksum:i31AC2A457B9B5BA2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001001 Genomic DNA. Translation: ACB25667.1.
    RefSeqiYP_001756350.1. NC_010505.1.

    Genome annotation databases

    EnsemblBacteriaiACB25667; ACB25667; Mrad2831_3691.
    GeneIDi6139744.
    KEGGimrd:Mrad2831_3691.
    PATRICi22575794. VBIMetRad70578_3772.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001001 Genomic DNA. Translation: ACB25667.1 .
    RefSeqi YP_001756350.1. NC_010505.1.

    3D structure databases

    ProteinModelPortali B1LW17.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 426355.Mrad2831_3691.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACB25667 ; ACB25667 ; Mrad2831_3691 .
    GeneIDi 6139744.
    KEGGi mrd:Mrad2831_3691.
    PATRICi 22575794. VBIMetRad70578_3772.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi RVWLWSR.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci MRAD426355:GJB5-3734-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Methylobacterium radiotolerans JCM 2831."
      US DOE Joint Genome Institute
      Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L.
      , Kyrpides N., Mikhailova N., Marx C.J., Richardson P.
      Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27329 / DSM 1819 / JCM 2831Imported.

    Entry informationi

    Entry nameiB1LW17_METRJ
    AccessioniPrimary (citable) accession number: B1LW17
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 29, 2008
    Last sequence update: April 29, 2008
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3