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B1LS91 (B1LS91_METRJ) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Mrad2831_0315 EMBL ACB22339.1
OrganismMethylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) [Complete proteome] [HAMAP] EMBL ACB22339.1
Taxonomic identifier426355 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesMethylobacteriaceaeMethylobacterium

Protein attributes

Sequence length555 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1LS91 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 8CD8BB9A21CEA1DE

FASTA55562,908
        10         20         30         40         50         60 
MINDLWYKNG IIYCLSVGTF MDANGDGIGD FAGLERRLDY IQGLGATAVW LMPFQPSPKK 

        70         80         90        100        110        120 
DGGYDIADYY GVDPDYGSLG DFVAFAHAAK QRGLRVLIDL VVNHTSDQHP WFQSARSDPD 

       130        140        150        160        170        180 
SPYRDWYVWS KERPATADEG MVFPGVQETT WTYDAKAKAW YFHRFFNFQP DLNTANPEVL 

       190        200        210        220        230        240 
AEILKIMGFW IQLGVSGFRM DAVPFVIAEK GAHVGGKPRE QFEMLRDLRE FLQWRQGDAI 

       250        260        270        280        290        300 
ILAEANILPK QDLDYFGDDA DRMHMMFNFQ VNQATFYALA AHDARPLVKA IEQTKPRPLS 

       310        320        330        340        350        360 
CQWGIFLRNH DELDLGRLTG KQRQSVFDAF GPEKGMQLYD RGIRRRFAPM LAGDPRRIRL 

       370        380        390        400        410        420 
AYSLMFTLPG TPVLRYGDEI GMGDELALPE RDCARTPMQW TSEHQGGFST AERTVLPLID 

       430        440        450        460        470        480 
HGPYGYAHLN VADQRHEEGS LLNWMQSMIR QRKEAPEIGW GDVVAMETGR PSVLALRYEW 

       490        500        510        520        530        540 
RGNAILCVHN LAPEPVEVAM ASGSPDPEHD ILVDVLTGSR SEVGEDGRHC LFMEGYGYHW 

       550 
FRVGGLDALL KRRPA 

« Hide

References

[1]"Complete sequence of chromosome of Methylobacterium radiotolerans JCM 2831."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Marx C.J., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27329 / DSM 1819 / JCM 2831.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001001 Genomic DNA. Translation: ACB22339.1.
RefSeqYP_001753022.1. NC_010505.1.

3D structure databases

ProteinModelPortalB1LS91.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING426355.Mrad2831_0315.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB22339; ACB22339; Mrad2831_0315.
GeneID6136157.
KEGGmrd:Mrad2831_0315.
PATRIC22568854. VBIMetRad70578_0341.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000220639.
KOK05343.
OMAEIGWGDF.
OrthoDBEOG6RVFV2.
ProtClustDBCLSK2394072.

Enzyme and pathway databases

BioCycMRAD426355:GJB5-317-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 2 hits.
InterProIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameB1LS91_METRJ
AccessionPrimary (citable) accession number: B1LS91
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: November 13, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)