Skip Header

Contribute Send feedback
Read comments (?) or add your own

B1LM63 (B1LM63_ECOSM) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:EcSMS35_0795
OrganismEscherichia coli (strain SMS-3-5 / SECEC) [Complete proteome] [HAMAP] EMBL ACB19343.1
Taxonomic identifier439855 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length427 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcell wall modification

Inferred from electronic annotation. Source: InterPro

   Cellular componentcell wall

Inferred from electronic annotation. Source: InterPro

   Molecular functionpectinesterase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1LM63 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: A4B4A1BFA4256513

FASTA42746,035
        10         20         30         40         50         60 
MNTFSVSRLA LALAFGVTLT ACSSTPPDQR PSDQTAPGTS SRPILSAKEA QNFDAQHYFA 

        70         80         90        100        110        120 
SLTPGAAAWN PSPITLPAQP DFVVGPAGTQ GVTHTTIQAA VDAAIIKRTN KRQYIAVMPG 

       130        140        150        160        170        180 
EYQGTVYVPA APGGITLYGT GEKPIDVKIG LSLDGGMSPA DWRHDVNPRG KYMPGKPAWY 

       190        200        210        220        230        240 
MYDSCQSKRS DSIGVLCSAV FWSQNNGLQL QNLTIENTLG DSVDAGNHPA VALRTDGDKV 

       250        260        270        280        290        300 
QINNVNILGR QNTFFVTNSG VQNRLETNRQ PRTLVTNSYI EGDVDIVSGR GAVVFDNTEF 

       310        320        330        340        350        360 
RVVNSRTQQE AYVFAPATLS NIYYGFLAVN SRFNASGDGV AQLGRSLDVD ANTNGQVVIR 

       370        380        390        400        410        420 
DSAINEGFNT AKPWADAVIS NRPFAGNTGN VDDNDEVQRN LNDTNYNRMW EYNNRGVGSK 


VVAEAKK 

« Hide

References

[1]"Insights into the environmental resistance gene pool from the genome sequence of the multidrug-resistant environmental isolate Escherichia coli SMS-3-5."
Fricke W.F., Wright M.S., Lindell A.H., Harkins D.M., Baker-Austin C., Ravel J., Stepanauskas R.
J. Bacteriol. 190:6779-6794(2008) [PubMed: 18708504] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000970 Genomic DNA. Translation: ACB19343.1.
RefSeqYP_001742875.1. NC_010498.1.

3D structure databases

ProteinModelPortalB1LM63.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1LM63.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000065287; EBESCP00000062929; EBESCG00000064334.
GeneID6143264.
GenomeReviewsGene locus EcSMS35_0795 in contig CP000970_GR.
KEGGecm:EcSMS35_0795.
PATRIC18430427. VBIEscCol6161_0950.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000010934.
HOGENOMHBG416454.
OMAFLATNSR.
ProtClustDBPRK10531.

Family and domain databases

InterProIPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
IPR018040. Pectinesterase_AS.
IPR000070. Pectinesterase_cat.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
KOK01051.
PfamPF01095. Pectinesterase. 1 hit.
[Graphical view]
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
PROSITEPS00503. PECTINESTERASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1LM63_ECOSM
AccessionPrimary (citable) accession number: B1LM63
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: January 25, 2012
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)