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B1LFV1 (B1LFV1_ECOSM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.- EMBL ACB17183.1
Gene names
Ordered Locus Names:EcSMS35_0019
OrganismEscherichia coli (strain SMS-3-5 / SECEC) [Complete proteome] [HAMAP] EMBL ACB17183.1
Taxonomic identifier439855 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length679 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B1LFV1 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: F4099CA84AC652D2

FASTA67978,629
        10         20         30         40         50         60 
MSFIKQDPHR LVWQQDDRYL WIEAWGENSL RVRSGRHLPV MRNENWALTQ DPGDAVAHIT 

        70         80         90        100        110        120 
WDEKQATLRN GKITAIVNLQ GQLSFWRNDD KCLLQEFWRQ RGEIGEDESA HGQYVSALNL 

       130        140        150        160        170        180 
QAREFKPIPG GKFTIKARFE ANDGEKLFGM GQYQQPNLDL KGCMLELAQR NSQASVPFLL 

       190        200        210        220        230        240 
SNQGYGFLWN NPAIGRVTFA QNGTEWVAEV SEQLDYWITA GDTPAEISEA YARVTGTPPM 

       250        260        270        280        290        300 
MPDYAMGFWQ CKLRYRNQQE LLEVARGYKQ RNLPISVIVI DFFHWPNQGD WMFDLRDWPD 

       310        320        330        340        350        360 
PDAMIAELKE MGIELMVSFW PTVDNRTESY REMKENGWLV HTERGLPINM DFLGNTTFFD 

       370        380        390        400        410        420 
ATHPGAREYV WNKAKRNYYD KGVKLFWLDE AEPEFGVYDY DNYRYYAGPV LEVGNIYPRM 

       430        440        450        460        470        480 
YAKTFFDGMQ AAGEKQVINL LRCAWAGSQK YGALVWSGDI HSSFRSLRNQ FAAGLNMGIA 

       490        500        510        520        530        540 
GIPWWTTDIG GFHGGNIHDP KFHELLIRWF QWGVFSPVMR LHGNRDPQVL PEQPYRDGIA 

       550        560        570        580        590        600 
QCPTGAPNEV WSYGEETGEI LTSCLQLREK LKPYISKIMA ETHEKNSPVM RTMFFEFPDQ 

       610        620        630        640        650        660 
AESWNIYDQY CFGPDLLVAP VMHEGTRSRD VWLPAGETWI DFYTHEHYAG GQKLHHCAPL 

       670 
HQIPVFIREK GKYRQLLPV 

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References

[1]"Insights into the environmental resistance gene pool from the genome sequence of the multidrug-resistant environmental isolate Escherichia coli SMS-3-5."
Fricke W.F., Wright M.S., Lindell A.H., Harkins D.M., Baker-Austin C., Ravel J., Stepanauskas R.
J. Bacteriol. 190:6779-6794(2008) [PubMed: 18708504] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000970 Genomic DNA. Translation: ACB17183.1.
RefSeqYP_001742136.1. NC_010498.1.

3D structure databases

ProteinModelPortalB1LFV1.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1LFV1.

Protein family/group databases

CAZyGH31. Glycoside Hydrolase Family 31.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000064730; EBESCP00000062372; EBESCG00000063777.
GeneID6145809.
GenomeReviewsGene locus EcSMS35_0019 in contig CP000970_GR.
KEGGecm:EcSMS35_0019.
PATRIC18428864. VBIEscCol6161_0193.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000011402.
HOGENOMHBG329982.
OMAWNNPAIG.
ProtClustDBCLSK873205.

Family and domain databases

InterProIPR011013. Glyco_hydro-type_carb-bd.
IPR000322. Glyco_hydro_31.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
KOK01811.
PANTHERPTHR22762. Glyco_hydro_31. 1 hit.
PfamPF01055. Glyco_hydro_31. 1 hit.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1LFV1_ECOSM
AccessionPrimary (citable) accession number: B1LFV1
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)