B1LDR0 (B1LDR0_ECOSM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator, GntR family EMBL ACB15891.1

Gene names

Ordered Locus Names:

EcSMS35_4851

Organism

Escherichia coli (strain SMS-3-5 / SECEC) [Complete proteome] [HAMAP] EMBL ACB15891.1

Taxonomic identifier

439855 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	257 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1LDR0 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: BC6467480EEFFF38	FASTA	257	29,337
	10 20 30 40 50 60 MKSVTSAQRP YQEVGAMIRD LIIKTPYNPG ERLPPEREIA EMLDVTRTVV REALIMLEIK 70 80 90 100 110 120 GLVEVRRGAG IYVLDSSDSQ NTDGPDANVC NDAGPFELLQ ARQLLESNIA EFAALQATRE 130 140 150 160 170 180 DIVKMRQALQ LEERELASSA PGSSESGDMQ FHLAIAEATH NSMLVELFRQ SWQWRENNPM 190 200 210 220 230 240 WIQLHSHLDD SLYRKEWLGD HKQILAALIK KDARAAKLAM WQHLENVKQR LLEFSNVDDI 250 YFDGYLFDSW PLDKVDA

References

[1]

"Insights into the environmental resistance gene pool from the genome sequence of the multidrug-resistant environmental isolate Escherichia coli SMS-3-5." Fricke W.F., Wright M.S., Lindell A.H., Harkins D.M., Baker-Austin C., Ravel J., Stepanauskas R. J. Bacteriol. 190:6779-6794(2008) [PubMed: 18708504] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000970 Genomic DNA. Translation: ACB15891.1.
RefSeq	YP_001746762.1. NC_010498.1.
3D structure databases
ProteinModelPortal	B1LDR0.
ModBase	Search...
Protein-protein interaction databases
STRING	B1LDR0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000060975; EBESCP00000058617; EBESCG00000060022.
GeneID	6143362.
GenomeReviews	Gene locus EcSMS35_4851 in contig CP000970_GR.
KEGG	ecm:EcSMS35_4851.
PATRIC	18438599. VBIEscCol6161_4949.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000009602.
HOGENOM	HBG700007.
OMA	ENIVNRT.
ProtClustDB	PRK10225.
Family and domain databases
InterPro	IPR011711. GntR_C. IPR000524. Tscrpt_reg_HTH_GntR. IPR011991. WHTH_trsnscrt_rep_DNA-bd. [Graphical view]
Gene3D	G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
KO	K13637.
Pfam	PF07729. FCD. 1 hit. PF00392. GntR. 1 hit. [Graphical view]
PRINTS	PR00035. HTHGNTR.
SMART	SM00895. FCD. 1 hit. SM00345. HTH_GNTR. 1 hit. [Graphical view]
PROSITE	PS50949. HTH_GNTR. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1LDR0_ECOSM

Accession

Primary (citable) accession number: B1LDR0

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	January 25, 2012
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)