B1LDH9 (B1LDH9_ECOSM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-galactosidase EMBL ACB18022.1
EC=3.2.1.22 EMBL ACB18022.1

Gene names

Name:	rafA EMBL ACB18022.1
Ordered Locus Names:	EcSMS35_3114

Organism

Escherichia coli (strain SMS-3-5 / SECEC) [Complete proteome] [HAMAP] EMBL ACB18022.1

Taxonomic identifier

439855 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	708 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ACB18022.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	raffinose alpha-galactosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1LDH9 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: AD9D7D1DB18E1214	FASTA	708	81,138
	10 20 30 40 50 60 MVSKYCRLSS PRSDLIIKTR PHAEIIWWGS ALKHFSPDDC ASLERPVANG RLDIDTPLTL 70 80 90 100 110 120 MAENALGLFS SPGLEGHRNG LDASPVFYTV DVEHTENTLR LTSEDSVAGL RLVSELVMTP 130 140 150 160 170 180 SGILKVRHAL TNLREGDWQI NRFAITLPLA ERAEEVMAFH GRWTREFQPH RVRLTHDAFV 190 200 210 220 230 240 LENRRGRTSH EHFPALIVGT PGFSEQQGEV WAVHLGWSGN HRMRCEAKTD GRRYVQAEAL 250 260 270 280 290 300 WMPGEKALRK NETLYTPWLY ACHSADGLNG MSQQYHRFLR DEIIRFPEQK PRPVHLNTWE 310 320 330 340 350 360 GIYFNHNPDY IMQMAERAAA LGVERFIIDD GWFKGRNDDR AALGDWYTDE QKYPNGLMPV 370 380 390 400 410 420 IKHVKSLGME FGIWVEPEMI NPDSDLFRLH PDWVLSMPGY SQPTGRYQYV LNLNIPEAFA 430 440 450 460 470 480 YIYERFLWLL GEHPVDYVKW DMNRELVQAG HEGRAAADAQ TRQFYRLLDL LRERFPHVEF 490 500 510 520 530 540 ESCASGGGRI DFEVLKRTHR FWASDNNDAL ERCTIQRGMS YFFPPEVMGA HIGHRRCHAT 550 560 570 580 590 600 FRQHSIAFRG LTALFGHMGL ELDPVAADAK ESDGYRRYAL LYKEWRQLIH TGVLWRVDMP 610 620 630 640 650 660 DPSIQVQGVV SPDQSQALFM ISQLAMPDYT LPGILRFPGL AAEVRYRLRV IDHPDLQVVG 670 680 690 700 EGGHTMRKLP VWMNQSLEAS GEWLAQGGIQ LPVLDPESAI LIALERAV

References

[1]

"Insights into the environmental resistance gene pool from the genome sequence of the multidrug-resistant environmental isolate Escherichia coli SMS-3-5." Fricke W.F., Wright M.S., Lindell A.H., Harkins D.M., Baker-Austin C., Ravel J., Stepanauskas R. J. Bacteriol. 190:6779-6794(2008) [PubMed: 18708504] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000970 Genomic DNA. Translation: ACB18022.1.
RefSeq	YP_001745131.1. NC_010498.1.
3D structure databases
ProteinModelPortal	B1LDH9.
ModBase	Search...
Protein-protein interaction databases
STRING	B1LDH9.
Protein family/group databases
CAZy	GH36. Glycoside Hydrolase Family 36.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000060843; EBESCP00000058485; EBESCG00000059890.
GeneID	6146988.
GenomeReviews	Gene locus EcSMS35_3114 in contig CP000970_GR.
KEGG	ecm:EcSMS35_3114.
PATRIC	18435144. VBIEscCol6161_3266.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000013654.
HOGENOM	HBG299823.
OMA	TPWLYAS.
ProtClustDB	CLSK888896.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR002252. Glyco_hydro_36. IPR000111. Glyco_hydro_GHD. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K07407.
Pfam	PF02065. Melibiase. 1 hit. [Graphical view]
PIRSF	PIRSF005536. Agal. 1 hit.
PRINTS	PR00743. GLHYDRLASE36.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00512. ALPHA_GALACTOSIDASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1LDH9_ECOSM

Accession

Primary (citable) accession number: B1LDH9

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)