B1LCP4 (B1LCP4_THESQ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Arabinogalactan endo-1,4-beta-galactosidase EMBL ACB09953.1
EC=3.2.1.89 EMBL ACB09953.1

Gene names

Ordered Locus Names:

TRQ2_1617

Organism

Thermotoga sp. (strain RQ2) [Complete proteome] [HAMAP] EMBL ACB09953.1

Taxonomic identifier

126740 [NCBI]

Taxonomic lineage

Bacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length	606 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ACB09953.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	arabinogalactan endo-1,4-beta-galactosidase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro glucosidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1LCP4 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: AE55FF82107ADD5B	FASTA	606	68,599
	10 20 30 40 50 60 MRGVLFVLMI SSMAFGLIVN PVKNLCEDFI FGMDVSMLYE IEQLGGKYFE NGVEKDCLEI 70 80 90 100 110 120 LKNHGINWIR LRVWNDPRDE NGNPLGGGNC DYLKMTEIAK RAKKLGMKVL LDFHYSDWWA 130 140 150 160 170 180 DPGKQNKPKE WEYLHGELLE RAVYSYTKLV LNHMRRNGAL PDMVQVGNEV NNGFLWPDGK 190 200 210 220 230 240 ISGEGAGGFD GFTRLLKAAI KAVREVDPDI KIVIHLAEGG NNSLFRWFFD EITRRNVDFD 250 260 270 280 290 300 VIGVSYYPYW HGTLEDLKNN LYDIATRYNK DVLVVETAYA WTLEDGDGYP NIFNGEEMEL 310 320 330 340 350 360 TGGYKATVQG QATFLRDLME VVNSVPNGHG LGIFYWEGDW IPVRGAGWKT GEGNPWDNQA 370 380 390 400 410 420 MFDFSGNALP SLNVFKLVKT SSPVEIAIKE ILPVEVTTNL GEVPKFPDAV KVLFSDDSIR 430 440 450 460 470 480 SLPVEWNFDS ALVEESGVYK VEGYIKDIDR KIFATLTVKG SRNYLKNPGF ETGEFSPWQV 490 500 510 520 530 540 SGDKKAVKVV KVNPSSNAHQ GEYAVNFWLD ESFSFELSQE VELPAGVYRV GFWTHGEKGV 550 560 570 580 590 600 KIALKVSDYG GDERSVEVET TGWLEWKNPE IRNIKVETGR IKITVSVEGR AGDWGFIDDF YLFREE

References

[1]

"Complete sequence of Thermotoga sp. RQ2." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Bruce D.B., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RQ2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000969 Genomic DNA. Translation: ACB09953.1.
RefSeq	YP_001739636.1. NC_010483.1.
3D structure databases
ProteinModelPortal	B1LCP4.
ModBase	Search...
Protein-protein interaction databases
STRING	B1LCP4.
Protein family/group databases
CAZy	GH53. Glycoside Hydrolase Family 53.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6093066.
GenomeReviews	Gene locus TRQ2_1617 in contig CP000969_GR.
KEGG	trq:TRQ2_1617.
PATRIC	23949892. VBITheSp108950_1652.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG465679.
OMA	MVAETSW.
ProtClustDB	CLSK875631.
Enzyme and pathway databases
BioCyc	TSP28240:TRQ2_1617-MONOMER.
Family and domain databases
InterPro	IPR011081. Big_4. IPR011683. Glyco_hydro_53. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01224.
Pfam	PF07532. Big_4. 1 hit. PF07745. Glyco_hydro_53. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B1LCP4_THESQ

Accession

Primary (citable) accession number: B1LCP4

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)