Skip Header

Contribute Send feedback
Read comments (?) or add your own

B1LCB9 (B1LCB9_THESQ) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Carbohydrate binding module 27 EMBL ACB09927.1
Gene names
Ordered Locus Names:TRQ2_1591
OrganismThermotoga sp. (strain RQ2) [Complete proteome] [HAMAP] EMBL ACB09927.1
Taxonomic identifier126740 [NCBI]
Taxonomic lineageBacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length669 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2020 Potential EMBL ACB09927.1
Chain21 – 669649 Potential EMBL ACB09927.1
PRO_5000317879

Sequences

Sequence LengthMass (Da)Tools
B1LCB9 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 0A498222581A5D27

FASTA66977,008
        10         20         30         40         50         60 
MRRFMFILLI VELSFVLFAS DEFVKVENGK FALNGKEFRF IGSNNYYMHY KSNRMIDSVL 

        70         80         90        100        110        120 
ESARDMGIKV LRIWGFLDGE SYCRDKNTYM HPEPGVFGVP EGISNAQSGF ERLDYTVAKA 

       130        140        150        160        170        180 
KELGIKLVIV LVNNWDDFGG MNQYVRWFGG THHDDFYRDE KIKEEYKKYV SFLVNHVNTY 

       190        200        210        220        230        240 
TGVPYREEPT IMAWELANEP RCETDKSGNT LVEWVKEMSS YIKSLDPNHL VAVGDEGFFS 

       250        260        270        280        290        300 
NYEGFKPYGG EAEWAYNGWS GVDWKKLLSI ETVDFGTFHL YPSHWGVSPE NYAQWGAKWI 

       310        320        330        340        350        360 
EDHIKIAKEI GKPVVLEEYG IPKSAPVNRT AIYRLWNDLV YDLGGDGAMF WMLAGIGEGW 

       370        380        390        400        410        420 
DKDERGYYPD YDGFRIVNDD SPEAELIREY AKLFNTGEDI REDTCSFILP KDGMEIKKTV 

       430        440        450        460        470        480 
EVRVGVFDYS NTFEKLSVKV EDLVFENEIE HLGYGIYGFD LDTTRIPDGE HEMFLEGHFQ 

       490        500        510        520        530        540 
GKTVKDSIKA KVVNEARYVL AEEVDFSSSE EVKSWWNSGT WQAEFGSPDI EWNGEVGNGA 

       550        560        570        580        590        600 
LQLNVKLPGK SDWEEVRVAR KFERLSECEI LEYDIYIPNV EGLKGRLRPY AVLNPGWVKI 

       610        620        630        640        650        660 
GLDMNNANVE SAEIITFGGK EYRRFHVRIE FDRTAGVKEL HIGIVGDHLR YDGPIFIDNV 


RLYKRTGGM

« Hide

References

[1]"Complete sequence of Thermotoga sp. RQ2."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Bruce D.B., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RQ2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000969 Genomic DNA. Translation: ACB09927.1.
RefSeqYP_001739610.1. NC_010483.1.

3D structure databases

ProteinModelPortalB1LCB9.
SMRB1LCB9. Positions 496-669.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1LCB9.

Protein family/group databases

CAZyCBM27. Carbohydrate-Binding Module Family 27.
GH5. Glycoside Hydrolase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6093040.
GenomeReviewsGene locus TRQ2_1591 in contig CP000969_GR.
KEGGtrq:TRQ2_1591.
PATRIC23949840. VBITheSp108950_1626.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG725977.
OMACEILEYD.
ProtClustDBCLSK875643.

Enzyme and pathway databases

BioCycTSP28240:TRQ2_1591-MONOMER.

Family and domain databases

InterProIPR015295. Carb-bd_module_27.
IPR008979. Galactose-bd-like.
IPR001547. Glyco_hydro_5.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PfamPF09212. CBM27. 1 hit.
PF00150. Cellulase. 1 hit.
[Graphical view]
SUPFAMSSF49785. Gal_bind_like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1LCB9_THESQ
AccessionPrimary (citable) accession number: B1LCB9
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info