B1LB25 (B1LB25_THESQ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha amylase catalytic region EMBL ACB09523.1

Gene names

Ordered Locus Names:

TRQ2_1179

Organism

Thermotoga sp. (strain RQ2) [Complete proteome] [HAMAP] EMBL ACB09523.1

Taxonomic identifier

126740 [NCBI]

Taxonomic lineage

Bacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length	422 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1LB25 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 851A043B8C171945	FASTA	422	50,209
	10 20 30 40 50 60 MNFKRLIIYE AFARAYPGEK GKKFDSLIKD LERLKGMGIN TVWLMPIHPT GIEGRKGTLG 70 80 90 100 110 120 SPYAIRDYYE IDPFIGTKDD FKRFVKRAHE LNMYVLMDMV LNHAAADNVL VRKHPEWFLR 130 140 150 160 170 180 DENGNPTRKV PDWTDIVDFD YSNGELRKYM INMMKYWVEE FDVDGFRCDV AGLIPLDFWL 190 200 210 220 230 240 QARKELDPLK RLIWLSETHD PYMYQAFDIT YDYDGYYRFR DFIEGRGSLR EYVDFLRMQD 250 260 270 280 290 300 HIYPRGYIKM RFLENHDQPR IAKFIEEDSL IHWIAFLFTF KGVPLVHNGQ EYGLKEDVDI 310 320 330 340 350 360 FNEYTLPFPM EENRVSILHR KLAHYRYGTG VFTEGEMLFV KNDQPEKVIS YLWRYENRYI 370 380 390 400 410 420 LCVLNPLLEN TKVTLDFSGI WESACIHSKN VFNDEIVRVP VKNSRAIVEI GKEPLILSFV LY

References

[1]

"Complete sequence of Thermotoga sp. RQ2." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Bruce D.B., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RQ2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000969 Genomic DNA. Translation: ACB09523.1.
RefSeq	YP_001739206.1. NC_010483.1.
3D structure databases
ProteinModelPortal	B1LB25.
ModBase	Search...
Protein-protein interaction databases
STRING	B1LB25.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6092614.
GenomeReviews	Gene locus TRQ2_1179 in contig CP000969_GR.
KEGG	trq:TRQ2_1179.
PATRIC	23948960. VBITheSp108950_1200.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG288491.
OMA	GIWESAC.
ProtClustDB	CLSK796068.
Enzyme and pathway databases
BioCyc	TSP28240:TRQ2_1179-MONOMER.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR006047. Glyco_hydro_13_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 2 hits. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B1LB25_THESQ

Accession

Primary (citable) accession number: B1LB25

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)