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Protein

Alpha-amylase

Gene

TRQ2_0983

Organism
Thermotoga sp. (strain RQ2)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciTSP126740:GH49-1014-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:TRQ2_0983Imported
OrganismiThermotoga sp. (strain RQ2)Imported
Taxonomic identifieri126740 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesThermotogaceaeThermotoga
ProteomesiUP000001687: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626 PotentialImportedAdd
BLAST
Chaini27 – 555529 PotentialImportedPRO_5000317813Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi126740.TRQ2_0983.

Structurei

3D structure databases

ProteinModelPortaliB1LAI5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000220640.
KOiK01176.
OMAiEVVEYYG.
OrthoDBiEOG6RZB0T.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 2 hits.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

B1LAI5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKTFLLLAL VFLLFLTSCF QTSMSQSLVS SNPHSNSTNT GDSASNLSIN
60 70 80 90 100
EVKYPVVYEI FIRSFYDSDG DGVGDINGVS QKVDYLRKLG IDAVWFMPFN
110 120 130 140 150
EAVSYHGYDI TDYYNVEKDY GTMEDLENMI QVLHENGIKV IMDLVINHTS
160 170 180 190 200
DEHPWFKDAV ENTTSSPYWD YYIMSLEDHS GQGHWHWKIN SKGQKVWYFG
210 220 230 240 250
LFGYNMPDLN HDSQKVREEV KKIVDFWISK GVDGFRIDAA KHIYGWSWDD
260 270 280 290 300
GIQESAEYFE WFRDYVLSKK PDAILVGEVF SGNTYDLSLY PIPVFNFALM
310 320 330 340 350
YSIRNYPEGQ DGMIENNWVE ESFLFLENHD LHRFFSHLQE HYKKFSESDY
360 370 380 390 400
EFIKKRAALW YFLIFTLKGS PVIYYGGEIG TRGFKWHGPV YDEPVREPMQ
410 420 430 440 450
WYASGTGEGQ TFWTKEVYKN AGITFGNADV DGCIYDDPYD GFSVEEQEND
460 470 480 490 500
PKSLLNFIRF ILNFRKDHDA ILNGDQTIFR DWKNLIAFYR ESSNEKLLVV
510 520 530 540 550
LNPDPVWQNS FTFEENMTMI LEVDFENFIW NESNVSFSAG ESFTVDPMKA

YIFKK
Length:555
Mass (Da):64,809
Last modified:April 29, 2008 - v1
Checksum:i2CFE3506AB5763E0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000969 Genomic DNA. Translation: ACB09333.1.
RefSeqiWP_012310860.1. NC_010483.1.
YP_001739016.1. NC_010483.1.

Genome annotation databases

EnsemblBacteriaiACB09333; ACB09333; TRQ2_0983.
GeneIDi6092413.
KEGGitrq:TRQ2_0983.
PATRICi23948544. VBITheSp108950_0997.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000969 Genomic DNA. Translation: ACB09333.1.
RefSeqiWP_012310860.1. NC_010483.1.
YP_001739016.1. NC_010483.1.

3D structure databases

ProteinModelPortaliB1LAI5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi126740.TRQ2_0983.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB09333; ACB09333; TRQ2_0983.
GeneIDi6092413.
KEGGitrq:TRQ2_0983.
PATRICi23948544. VBITheSp108950_0997.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000220640.
KOiK01176.
OMAiEVVEYYG.
OrthoDBiEOG6RZB0T.

Enzyme and pathway databases

BioCyciTSP126740:GH49-1014-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 2 hits.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RQ2Imported.

Entry informationi

Entry nameiB1LAI5_THESQ
AccessioniPrimary (citable) accession number: B1LAI5
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: January 7, 2015
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.