Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

B1LAI5 (B1LAI5_THESQ) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:TRQ2_0983 EMBL ACB09333.1
OrganismThermotoga sp. (strain RQ2) [Complete proteome] [HAMAP] EMBL ACB09333.1
Taxonomic identifier126740 [NCBI]
Taxonomic lineageBacteriaThermotogaeThermotogalesThermotogaceaeThermotoga

Protein attributes

Sequence length555 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   DomainSignal EMBL ACB09333.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2626 Potential EMBL ACB09333.1
Chain27 – 555529 Potential EMBL ACB09333.1
PRO_5000317813

Sequences

Sequence LengthMass (Da)Tools
B1LAI5 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 2CFE3506AB5763E0

FASTA55564,809
        10         20         30         40         50         60 
MKKTFLLLAL VFLLFLTSCF QTSMSQSLVS SNPHSNSTNT GDSASNLSIN EVKYPVVYEI 

        70         80         90        100        110        120 
FIRSFYDSDG DGVGDINGVS QKVDYLRKLG IDAVWFMPFN EAVSYHGYDI TDYYNVEKDY 

       130        140        150        160        170        180 
GTMEDLENMI QVLHENGIKV IMDLVINHTS DEHPWFKDAV ENTTSSPYWD YYIMSLEDHS 

       190        200        210        220        230        240 
GQGHWHWKIN SKGQKVWYFG LFGYNMPDLN HDSQKVREEV KKIVDFWISK GVDGFRIDAA 

       250        260        270        280        290        300 
KHIYGWSWDD GIQESAEYFE WFRDYVLSKK PDAILVGEVF SGNTYDLSLY PIPVFNFALM 

       310        320        330        340        350        360 
YSIRNYPEGQ DGMIENNWVE ESFLFLENHD LHRFFSHLQE HYKKFSESDY EFIKKRAALW 

       370        380        390        400        410        420 
YFLIFTLKGS PVIYYGGEIG TRGFKWHGPV YDEPVREPMQ WYASGTGEGQ TFWTKEVYKN 

       430        440        450        460        470        480 
AGITFGNADV DGCIYDDPYD GFSVEEQEND PKSLLNFIRF ILNFRKDHDA ILNGDQTIFR 

       490        500        510        520        530        540 
DWKNLIAFYR ESSNEKLLVV LNPDPVWQNS FTFEENMTMI LEVDFENFIW NESNVSFSAG 

       550 
ESFTVDPMKA YIFKK 

« Hide

References

[1]"Complete sequence of Thermotoga sp. RQ2."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Bruce D.B., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RQ2 EMBL ACB09333.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000969 Genomic DNA. Translation: ACB09333.1.
RefSeqYP_001739016.1. NC_010483.1.

3D structure databases

ProteinModelPortalB1LAI5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING126740.TRQ2_0983.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB09333; ACB09333; TRQ2_0983.
GeneID6092413.
KEGGtrq:TRQ2_0983.
PATRIC23948544. VBITheSp108950_0997.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000220640.
KOK01176.
OMAPFLSNHD.
OrthoDBEOG6RZB0T.
ProtClustDBCLSK875988.

Enzyme and pathway databases

BioCycTSP126740:GH49-1014-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 2 hits.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 2 hits.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameB1LAI5_THESQ
AccessionPrimary (citable) accession number: B1LAI5
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: November 13, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)