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B1LA38 (B1LA38_THESQ) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Polysaccharide deacetylase EMBL ACB09186.1
Gene names
Ordered Locus Names:TRQ2_0834
OrganismThermotoga sp. (strain RQ2) [Complete proteome] [HAMAP] EMBL ACB09186.1
Taxonomic identifier126740 [NCBI]
Taxonomic lineageBacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length239 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2020 Potential EMBL ACB09186.1
Chain21 – 239219 Potential EMBL ACB09186.1
PRO_5000317780

Sequences

Sequence LengthMass (Da)Tools
B1LA38 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 61C39C32916BFA4F

FASTA23927,215
        10         20         30         40         50         60 
MKRLLVFLSI FLTTVLLFSI DSKVNSKEEN GVKLVALTFD DGPDVKLTSA VLDTLEKHGV 

        70         80         90        100        110        120 
VATFFVVGQR LNESTRAILE RMISMGCEIG NHSWNYEPLD KKDPETIKDH IERTNKLIKK 

       130        140        150        160        170        180 
YAGKEPRFFR PPNLAVSGTM FDVINMPFVS GVLGYDWAGC DRDPQKIVNN VLKGVRDGAI 

       190        200        210        220        230 
ILLHDVQPEP HPIVEVLEIL IPELKKRGYE FVTLSELFKR KGVNPEDPVY RKKMWVYVE

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References

[1]"Complete sequence of Thermotoga sp. RQ2."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Bruce D.B., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RQ2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000969 Genomic DNA. Translation: ACB09186.1.
RefSeqYP_001738869.1. NC_010483.1.

3D structure databases

ProteinModelPortalB1LA38.
SMRB1LA38. Positions 33-228.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1LA38.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6092264.
GenomeReviewsGene locus TRQ2_0834 in contig CP000969_GR.
KEGGtrq:TRQ2_0834.
PATRIC23948244. VBITheSp108950_0847.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG751163.
OMAMFAPYQW.
ProtClustDBCLSK794925.

Enzyme and pathway databases

BioCycTSP28240:TRQ2_0834-MONOMER.

Family and domain databases

InterProIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR002509. Polysac_deacetylase.
[Graphical view]
Gene3DG3DSA:3.20.20.370. Polysac_deacetylase. 1 hit.
PfamPF01522. Polysacc_deac_1. 1 hit.
[Graphical view]
SUPFAMSSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1LA38_THESQ
AccessionPrimary (citable) accession number: B1LA38
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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