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B1L9H6 (B1L9H6_THESQ) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Beta-galactosidase PIRNR PIRNR001084
Short name=Beta-gal PIRNR PIRNR001084
EC=3.2.1.23 PIRNR PIRNR001084
Gene names
Ordered Locus Names:TRQ2_0621
OrganismThermotoga sp. (strain RQ2) [Complete proteome] [HAMAP] EMBL ACB08974.1
Taxonomic identifier126740 [NCBI]
Taxonomic lineageBacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length672 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1501Proton donor By similarity PIRSR PIRSR001084-1
Active site3111Nucleophile By similarity PIRSR PIRSR001084-1
Metal binding1151Zinc By similarity PIRSR PIRSR001084-3
Metal binding1551Zinc By similarity PIRSR PIRSR001084-3
Metal binding1571Zinc By similarity PIRSR PIRSR001084-3
Metal binding1601Zinc By similarity PIRSR PIRSR001084-3
Binding site1111Substrate By similarity PIRSR PIRSR001084-2
Binding site1491Substrate By similarity PIRSR PIRSR001084-2
Binding site3191Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
B1L9H6 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: B569064E164D74F0

FASTA67278,880
        10         20         30         40         50         60 
MVNPKLPVIW YGGDYYPEQW DEETFERDIR MFKEAGINVV TLGVFSWSLI QPDENTYDFS 

        70         80         90        100        110        120 
FFEKVMDRLY KEGIYVCLAT PTSAPPHWMT QKYPEILLTD VNGVKREKGG RQNFCPNSEK 

       130        140        150        160        170        180 
YRYFARNIAE KLAEHFKDHP ALVLWHVNNE YLNYCYCDIC RGKFQNWLKE KYGTLDELNR 

       190        200        210        220        230        240 
RWNTRFWSQT FTAWEEIPVP TTRSVLFWRK DRYQSVLPEL YLDYRRFMTQ SMLECFLEEY 

       250        260        270        280        290        300 
RAIKKHTPDI PVTTNLIAAT FKEWNYFEWA NHMDVAAWDN YPGYKEDFSV ISLRHSLIRG 

       310        320        330        340        350        360 
LKEGKPFVLM EQSPSQACWR WYNPQKRPGE MRLWSYHALA HGAETLMFFQ LRQSKGGVEK 

       370        380        390        400        410        420 
FHGAVITHVD SPNTRVFQEV KRVGEEIKSL SDILDTRVVS QTALLFDWES WWAMEDTLTP 

       430        440        450        460        470        480 
NIDFKYLNEA EKYFKALVKT GLGVDVVGKD QNFEGYRIIV APALYMVDEE LARKLKDYVS 

       490        500        510        520        530        540 
NGGILILTTM SGIVDEDDQV VLGGYPGYLR DLMGGYVEEI DALPPEEKNE ILMFGKRYEC 

       550        560        570        580        590        600 
SLVFDYIKTT TAEVLGRFGR DYYMNEPAVL RNRYGGGWVY YVGSSASFDL VWDLVKFIER 

       610        620        630        640        650        660 
EHDLRAEITP PDGVEVIKKV KGEKTFYFLF NHSHEPQIVD LPEGTFRDLI KGNLYEKKAR 

       670 
LQPLDVLILL KE

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References

[1]"Complete sequence of Thermotoga sp. RQ2."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Bruce D.B., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RQ2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000969 Genomic DNA. Translation: ACB08974.1.
RefSeqYP_001738657.1. NC_010483.1.

3D structure databases

ProteinModelPortalB1L9H6.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1L9H6.

Protein family/group databases

CAZyGH42. Glycoside Hydrolase Family 42.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6092038.
GenomeReviewsGene locus TRQ2_0621 in contig CP000969_GR.
KEGGtrq:TRQ2_0621.
PATRIC23947790. VBITheSp108950_0632.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG476453.
OMAMFFQLRQ.
ProtClustDBCLSK793327.

Enzyme and pathway databases

BioCycTSP28240:TRQ2_0621-MONOMER.

Family and domain databases

InterProIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK12308.
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1L9H6_THESQ
AccessionPrimary (citable) accession number: B1L9H6
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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