Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Daunorubicin resistance ABC transporter, inner membrane subunit B

Gene

Kcr_0409

Organism
Korarchaeum cryptofilum (strain OPF8)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Daunorubicin resistance ABC transporter, inner membrane subunit BImported
Gene namesi
Ordered Locus Names:Kcr_0409Imported
OrganismiKorarchaeum cryptofilum (strain OPF8)Imported
Taxonomic identifieri374847 [NCBI]
Taxonomic lineageiArchaeaCandidatus KorarchaeotaCandidatus Korarchaeum
Proteomesi
  • UP000001686 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei28 – 49HelicalSequence analysisAdd BLAST22
Transmembranei61 – 87HelicalSequence analysisAdd BLAST27
Transmembranei108 – 132HelicalSequence analysisAdd BLAST25
Transmembranei144 – 163HelicalSequence analysisAdd BLAST20
Transmembranei175 – 194HelicalSequence analysisAdd BLAST20
Transmembranei229 – 251HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi374847.Kcr_0409.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 220ABC2_membraneInterPro annotationAdd BLAST210

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiarCOG01467. Archaea.
COG0842. LUCA.
HOGENOMiHOG000223008.
InParanoidiB1L3Y6.
KOiK01992.
OMAiWVISGAM.

Family and domain databases

InterProiIPR013525. ABC_2_trans.
IPR000412. ABC_2_transport.
IPR005942. Daunbcin-R_ABC-transpt.
[Graphical view]
PfamiPF01061. ABC2_membrane. 1 hit.
[Graphical view]
PIRSFiPIRSF006648. DrrB. 1 hit.
PRINTSiPR00164. ABC2TRNSPORT.
TIGRFAMsiTIGR01247. drrB. 1 hit.
PROSITEiPS51012. ABC_TM2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1L3Y6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIKMNERNIV YAMLYRQLKR YFRARSRVLG TIINPLMFFL FLGMGFSASM
60 70 80 90 100
RGMSAAIGVD YLAFLAPGIA VMTAFSSSFI GGISVIFDKE FGFLKEVLVA
110 120 130 140 150
PASRTYAIIG RALGDSITSA LQSLLIIALM YVIVPSLRIE GLPFAIAICF
160 170 180 190 200
ITSLMFNSLG IAIASKMRSP EGFQLIVNVL IFPLIFLSGA FYPINNLPDV
210 220 230 240 250
VKPIFYVNPL TYSVDLTRYF MTGISSLPIY LSLSALLLLT SIFTLLSARV

FNRSTLD
Length:257
Mass (Da):28,391
Last modified:April 29, 2008 - v1
Checksum:i09C499C4F7F6C56D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000968 Genomic DNA. Translation: ACB07165.1.

Genome annotation databases

EnsemblBacteriaiACB07165; ACB07165; Kcr_0409.
KEGGikcr:Kcr_0409.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000968 Genomic DNA. Translation: ACB07165.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi374847.Kcr_0409.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB07165; ACB07165; Kcr_0409.
KEGGikcr:Kcr_0409.

Phylogenomic databases

eggNOGiarCOG01467. Archaea.
COG0842. LUCA.
HOGENOMiHOG000223008.
InParanoidiB1L3Y6.
KOiK01992.
OMAiWVISGAM.

Family and domain databases

InterProiIPR013525. ABC_2_trans.
IPR000412. ABC_2_transport.
IPR005942. Daunbcin-R_ABC-transpt.
[Graphical view]
PfamiPF01061. ABC2_membrane. 1 hit.
[Graphical view]
PIRSFiPIRSF006648. DrrB. 1 hit.
PRINTSiPR00164. ABC2TRNSPORT.
TIGRFAMsiTIGR01247. drrB. 1 hit.
PROSITEiPS51012. ABC_TM2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB1L3Y6_KORCO
AccessioniPrimary (citable) accession number: B1L3Y6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: November 2, 2016
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.