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B1L3E4

- SYR_KORCO

UniProt

B1L3E4 - SYR_KORCO

Protein

Arginine--tRNA ligase

Gene

argS

Organism
Korarchaeum cryptofilum (strain OPF8)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (29 Apr 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

    GO - Molecular functioni

    1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
    2. ATP binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetase, Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciKCRY374847:GH12-218-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
    Alternative name(s):
    Arginyl-tRNA synthetaseUniRule annotation
    Short name:
    ArgRSUniRule annotation
    Gene namesi
    Name:argSUniRule annotation
    Ordered Locus Names:Kcr_0213
    OrganismiKorarchaeum cryptofilum (strain OPF8)
    Taxonomic identifieri374847 [NCBI]
    Taxonomic lineageiArchaeaKorarchaeotaCandidatus Korarchaeum
    ProteomesiUP000001686: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 632632Arginine--tRNA ligasePRO_1000095374Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi374847.Kcr_0213.

    Structurei

    3D structure databases

    ProteinModelPortaliB1L3E4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Motif

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Motifi129 – 13911"HIGH" regionAdd
    BLAST

    Sequence similaritiesi

    Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0018.
    HOGENOMiHOG000247213.
    KOiK01887.
    OMAiLCNVLAK.

    Family and domain databases

    Gene3Di1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPiMF_00123. Arg_tRNA_synth.
    InterProiIPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view]
    PANTHERiPTHR11956. PTHR11956. 1 hit.
    PfamiPF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 2 hits.
    [Graphical view]
    PRINTSiPR01038. TRNASYNTHARG.
    SMARTiSM00836. DALR_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF47323. SSF47323. 1 hit.
    TIGRFAMsiTIGR00456. argS. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B1L3E4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIKDPLGAVK STFAEEVNRV LRDLGSATRF SPIQVSRVRK DYASYGLPVG    50
    FKVAKDLNLD PERAAKTVLD RIDMSRIAYS SDAYAESGYL NLRIDKARFF 100
    RDILKLASSE ELGRGERKGV VGMVEHTSAN PVHPLHVGSG RNAVIGDSFS 150
    RILNFLGWDV RRHYLVNDCN LQVAILAAGR SKVRDLIPKG KVDHWFGLIY 200
    AISNAFLEIW RIKNGFNSES KIEEWSEVVE RIGRMEPELL RIGELSEEEV 250
    MSLLREYQRK EGGSVQMFRE ITESVLRGFV ETLERMGITY DSFDRESELI 300
    WDGWVDRAIE KLESSGYLKR EGKAAYVDLW EAAKGDENVR KVFELSEDDI 350
    SKLEREGKLG EVIPRKFYLT RSDGTWLYTG TDVAYSLYKF DGLGVSFCYN 400
    VIASEQNMEQ KGVRACLALM GHDPGKLIHL SYEMVNLVGA AMSGRRGLYI 450
    TLDEVLDEAK RRVEAILKER GIYDEEICEK VAIGALKYGL ISVSPNKVVQ 500
    FRWERVLNLE ENSGPFIQYA YTRALNIIKK AQGVPEDFDP NELKSDAEIT 550
    IVQMISEFPE RVWSAFNLMR PDIIASYANE LASQFNKFYE DHPVLSAARP 600
    EERAARLNLV NAVKGTLGLA MDLIGIPRLE RM 632
    Length:632
    Mass (Da):71,667
    Last modified:April 29, 2008 - v1
    Checksum:i751ACAF493D4691C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000968 Genomic DNA. Translation: ACB06973.1.
    RefSeqiYP_001736656.1. NC_010482.1.

    Genome annotation databases

    EnsemblBacteriaiACB06973; ACB06973; Kcr_0213.
    GeneIDi6093502.
    KEGGikcr:Kcr_0213.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000968 Genomic DNA. Translation: ACB06973.1 .
    RefSeqi YP_001736656.1. NC_010482.1.

    3D structure databases

    ProteinModelPortali B1L3E4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 374847.Kcr_0213.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACB06973 ; ACB06973 ; Kcr_0213 .
    GeneIDi 6093502.
    KEGGi kcr:Kcr_0213.

    Phylogenomic databases

    eggNOGi COG0018.
    HOGENOMi HOG000247213.
    KOi K01887.
    OMAi LCNVLAK.

    Enzyme and pathway databases

    BioCyci KCRY374847:GH12-218-MONOMER.

    Family and domain databases

    Gene3Di 1.10.730.10. 1 hit.
    3.30.1360.70. 1 hit.
    3.40.50.620. 1 hit.
    HAMAPi MF_00123. Arg_tRNA_synth.
    InterProi IPR001278. Arg-tRNA-ligase.
    IPR005148. Arg-tRNA-synth_N.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view ]
    PANTHERi PTHR11956. PTHR11956. 1 hit.
    Pfami PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 2 hits.
    [Graphical view ]
    PRINTSi PR01038. TRNASYNTHARG.
    SMARTi SM00836. DALR_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47323. SSF47323. 1 hit.
    TIGRFAMsi TIGR00456. argS. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: OPF8.

    Entry informationi

    Entry nameiSYR_KORCO
    AccessioniPrimary (citable) accession number: B1L3E4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 24, 2009
    Last sequence update: April 29, 2008
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Aminoacyl-tRNA synthetases
      List of aminoacyl-tRNA synthetase entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3