B1L2F8 (B1L2F8_CLOBM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
LycA EMBL ACA57283.1

Gene names

Ordered Locus Names:

CLK_A0069

Encoded on

Plasmid pCLK EMBL ACA57283.1

Organism

Clostridium botulinum (strain Loch Maree / Type A3) [Complete proteome] [HAMAP]

Taxonomic identifier

498214 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	316 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Plasmid EMBL ACA57283.1
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro lysozyme activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1L2F8 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 0C4499005A1C6530	FASTA	316	35,500
	10 20 30 40 50 60 MLKGIDVSEQ QGEIDWKAVK NSGIQFAILR AGYGKNNIDK QFINNANGCT SVGMPFGLYW 70 80 90 100 110 120 FSYAYTEDMA RKEAQYCIAQ ATKYKISYPI CYDLEYDTIR YANNCGVTIT KSLATKMVHE 130 140 150 160 170 180 FCQEVERNGY FSMNYSNEDF LLNKFDSSLL KRYALWYAWY NNSLNRKCGI WQYSENGRVP 190 200 210 220 230 240 GIAGAAVDMN YCYLNMAEGA NTKLNNNTSR GEHYLIRELQ QEINSQGFGK VVVDGIAGQA 250 260 270 280 290 300 TINSAPICKQ GERGGITKVI QQMLINIGYP VGSHGADGVF GDDTVTAIKA FQRDCHLVVD 310 GIVGKETWEA LFRNLK

References

[1]

"Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids." Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S. PLoS ONE 2:E1271-E1271(2007) [PubMed: 18060065] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000963 Genomic DNA. Translation: ACA57283.1.
RefSeq	YP_001715696.1. NC_010418.1.
3D structure databases
ProteinModelPortal	B1L2F8.
ModBase	Search...
Protein-protein interaction databases
STRING	B1L2F8.
Protein family/group databases
CAZy	GH25. Glycoside Hydrolase Family 25.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6030490.
GenomeReviews	Gene locus CLK_A0069 in contig CP000963_GR.
KEGG	cbl:CLK_A0069.
PATRIC	19384812. VBICloBot822_0065.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG420057.
OMA	FINNANG.
ProtClustDB	CLSK2327940.
Family and domain databases
InterPro	IPR002053. Glyco_hydro_25. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR002477. Peptidoglycan-bd-like. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:1.10.101.10. PGBD_1. 1 hit.
Pfam	PF01183. Glyco_hydro_25. 1 hit. PF01471. PG_binding_1. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF47090. PGBD_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B1L2F8_CLOBM

Accession

Primary (citable) accession number: B1L2F8

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)