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B1L100 (B1L100_CLOBM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:CLK_2598
OrganismClostridium botulinum (strain Loch Maree / Type A3) [Complete proteome] [HAMAP]
Taxonomic identifier498214 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length392 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the thiolase family. RuleBase RU003557

Sequences

Sequence LengthMass (Da)Tools
B1L100 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 42D19994861B01C7

FASTA39241,848
        10         20         30         40         50         60 
MKNVVIASAV RTPIGKFGGT LKDVSAVELG SIVIKEALKR ANVNPEDVDE VIMGNVLQAG 

        70         80         90        100        110        120 
LGQNTTRQSL VAAGIPVEVP GFTINKVCGS GLRAVSLAAQ LIKVGDDDIV VAGGTENMSA 

       130        140        150        160        170        180 
APYILQKARW GQRMGDGKII DEMIKDGLWE SFNDYHMGIT AENIAEQWGI TREEQDKFSA 

       190        200        210        220        230        240 
KSQQKAEKAV KEGRFKEEIV PVVIKSRKGE VVFDTDEFPR FGATEESLSK LKPAFKKYGT 

       250        260        270        280        290        300 
VTAGNASGIN DGAAALVIMS EEKANELGIK PLAKIVAYGT SGVDPKIMGY GPFYATKKTL 

       310        320        330        340        350        360 
EKANLKIEDM DLIEANEAFA AQSLAVAKDL GFDMDKVNVN GGAIALGHPI GCSGARILTT 

       370        380        390 
LLYEMEKRDS RNGLATLCIG GGMGTAIIVE RY 

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References

[1]"Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids."
Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S.
PLoS ONE 2:E1271-E1271(2007) [PubMed: 18060065] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000962 Genomic DNA. Translation: ACA54010.1.
RefSeqYP_001788520.1. NC_010520.1.

3D structure databases

ProteinModelPortalB1L100.
SMRB1L100. Positions 3-392.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1L100.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6152806.
GenomeReviewsGene locus CLK_2598 in contig CP000962_GR.
KEGGcbl:CLK_2598.
PATRIC19391808. VBICloBot822_3509.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG370930.
OMARQVAITA.
ProtClustDBPRK05790.

Family and domain databases

InterProIPR002155. Thiolase.
IPR016039. Thiolase-like.
IPR016038. Thiolase-like_subgr.
IPR020615. Thiolase_acyl_enz_int_AS.
IPR020610. Thiolase_AS.
IPR020617. Thiolase_C.
IPR020613. Thiolase_CS.
IPR020616. Thiolase_N.
[Graphical view]
Gene3DG3DSA:3.40.47.10. Thiolase-like_subgr. 4 hits.
KOK00626.
PANTHERPTHR18919. Thiolase. 1 hit.
PfamPF02803. Thiolase_C. 1 hit.
PF00108. Thiolase_N. 1 hit.
[Graphical view]
PIRSFPIRSF000429. Ac-CoA_Ac_transf. 1 hit.
SUPFAMSSF53901. Thiolase-like. 2 hits.
TIGRFAMsTIGR01930. AcCoA-C-Actrans. 1 hit.
PROSITEPS00098. THIOLASE_1. 1 hit.
PS00737. THIOLASE_2. 1 hit.
PS00099. THIOLASE_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1L100_CLOBM
AccessionPrimary (citable) accession number: B1L100
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)