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B1KZY0 (3MGH_CLOBM) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative 3-methyladenine DNA glycosylase

EC=3.2.2.-
Gene names
Ordered Locus Names:CLK_0705
OrganismClostridium botulinum (strain Loch Maree / Type A3) [Complete proteome] [HAMAP]
Taxonomic identifier498214 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length203 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the DNA glycosylase MPG family.

Ontologies

Keywords
   Biological processDNA damage
DNA repair
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processbase-excision repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

alkylbase DNA N-glycosylase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 203203Putative 3-methyladenine DNA glycosylase HAMAP-Rule MF_00527
PRO_1000127759

Sequences

Sequence LengthMass (Da)Tools
B1KZY0 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: A653FCA5D7328DDB

FASTA20323,547
        10         20         30         40         50         60 
MRLTRDFYAK DARVLAKELL GKVLVREVDG IKLKGKIVET EAYIGAIDKA SHAYGGRRTK 

        70         80         90        100        110        120 
RTEPLYGKPG IAYVYFIYGK YFCFNIISKT EGEAEGVLIR ALEPLENINL ISKLRFNKEF 

       130        140        150        160        170        180 
EELNNYQRKN ITSGPSKLCM AFNINRDNNW EDLCESSSLY VEDVLYNDFE IIETVRVGID 

       190        200 
YAEEARDFLW RYYIKDNAFV SVK 

« Hide

References

[1]"Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids."
Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S.
PLoS ONE 2:E1271-E1271(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Loch Maree / Type A3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000962 Genomic DNA. Translation: ACA54217.1.
RefSeqYP_001786652.1. NC_010520.1.

3D structure databases

ProteinModelPortalB1KZY0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING498214.CLK_0705.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA54217; ACA54217; CLK_0705.
GeneID6151712.
KEGGcbl:CLK_0705.
PATRIC19388024. VBICloBot822_1625.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2094.
HOGENOMHOG000224224.
KOK03652.
OMAEHISSQY.
OrthoDBEOG6Q2SQ1.
ProtClustDBPRK00802.

Enzyme and pathway databases

BioCycCBOT498214:GH05-1366-MONOMER.

Family and domain databases

Gene3D3.10.300.10. 1 hit.
HAMAPMF_00527. 3MGH.
InterProIPR011034. Formyl_transferase_C-like.
IPR003180. PurDNA_glycsylse.
[Graphical view]
PANTHERPTHR10429. PTHR10429. 1 hit.
PfamPF02245. Pur_DNA_glyco. 1 hit.
[Graphical view]
SUPFAMSSF50486. SSF50486. 1 hit.
TIGRFAMsTIGR00567. 3mg. 1 hit.
ProtoNetSearch...

Entry information

Entry name3MGH_CLOBM
AccessionPrimary (citable) accession number: B1KZY0
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 29, 2008
Last modified: February 19, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families