B1KWN4 (RL19_CLOBM) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L19

Gene names

Name:	rplS
Ordered Locus Names:	CLK_1821

Organism

Clostridium botulinum (strain Loch Maree / Type A3) [Complete proteome] [HAMAP]

Taxonomic identifier

498214 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	114 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site By similarity. HAMAP MF_00402
Sequence similarities	Belongs to the ribosomal protein L19P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 114	114	50S ribosomal protein L19 HAMAP MF_00402		PRO_1000193812

Sequences

	Sequence		Length	Mass (Da)
	B1KWN4 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: D13443FD61121814	FASTA	114	13,170
	10 20 30 40 50 60 MLEVIKAIEA EQVRNDLPEF HVGDTVKVHQ KIKEGTRERV QIFEGTVLKR QNGGARETFT 70 80 90 100 110 VRRVAYNVAV EKTFPVNSPL IEKIQVVRKG KVRRAKLYYL RDRVGKAAKV KERI

References

[1]

"Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids." Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S. PLoS ONE 2:E1271-E1271(2007) [PubMed: 18060065] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Loch Maree / Type A3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000962 Genomic DNA. Translation: ACA54250.1.
RefSeq	YP_001787756.1. NC_010520.1.
3D structure databases
ProteinModelPortal	B1KWN4.
ModBase	Search...
Protein-protein interaction databases
STRING	B1KWN4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6153468.
GenomeReviews	Gene locus CLK_1821 in contig CP000962_GR.
KEGG	cbl:CLK_1821.
PATRIC	19390244. VBICloBot822_2735.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG611003.
OMA	FPLHSPI.
ProtClustDB	PRK05338.
Family and domain databases
HAMAP	MF_00402. Ribosomal_L19. [Tree]
InterPro	IPR001857. Ribosomal_L19. IPR018257. Ribosomal_L19_CS. IPR008991. Translation_prot_SH3-like. [Graphical view]
KO	K02884.
PANTHER	PTHR15680. Ribosomal_L19. 1 hit.
Pfam	PF01245. Ribosomal_L19. 1 hit. [Graphical view]
PIRSF	PIRSF002191. Ribosomal_L19. 1 hit.
PRINTS	PR00061. RIBOSOMALL19.
SUPFAM	SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR01024. RplS_bact. 1 hit.
PROSITE	PS01015. RIBOSOMAL_L19. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL19_CLOBM

Accession

Primary (citable) accession number: B1KWN4

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	April 29, 2008
Last modified:	January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program