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B1KW33 (B1KW33_CLOBM) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414

EC=1.15.1.1 RuleBase RU000414
Gene names
Name:sodA EMBL ACA54779.1
Ordered Locus Names:CLK_1727 EMBL ACA54779.1
OrganismClostridium botulinum (strain Loch Maree / Type A3) [Complete proteome] [HAMAP] EMBL ACA54779.1
Taxonomic identifier498214 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length198 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU000414 EMBL ACA54779.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processsuperoxide metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

superoxide dismutase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1KW33 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: B05AB4B52A53A885

FASTA19823,382
        10         20         30         40         50         60 
MAHTLPNLNY DYNALEPHYD EQTLKIHHDI HHKTYVDGLN KAEQKLQEAR ESGDFTLIKH 

        70         80         90        100        110        120 
WEKEIAFHGS GHILHTLFWE NMTPNGNLNP EGAAIERIKQ DFGDYEKFKK QFTEAAIAVE 

       130        140        150        160        170        180 
GSGWTILAWN PMFQKLVILQ AEKHQNLTQW GVVPLLILDL WEHAYYLKYQ NRRAEFINAW 

       190 
WNIVNWDIVN TRYDNAIK 

« Hide

References

[1]"Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids."
Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S.
PLoS ONE 2:E1271-E1271(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Loch Maree / Type A3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000962 Genomic DNA. Translation: ACA54779.1.
RefSeqYP_001787662.1. NC_010520.1.

3D structure databases

ProteinModelPortalB1KW33.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING498214.CLK_1727.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA54779; ACA54779; CLK_1727.
GeneID6153838.
KEGGcbl:CLK_1727.
PATRIC19390056. VBICloBot822_2641.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0605.
HOGENOMHOG000013583.
KOK04564.
OMAEQVYDHQ.
OrthoDBEOG63NMNT.
ProtClustDBCLSK911931.

Enzyme and pathway databases

BioCycCBOT498214:GH05-2382-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1KW33_CLOBM
AccessionPrimary (citable) accession number: B1KW33
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: December 11, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)