B1KV96 (B1KV96_CLOBM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator, AraC family EMBL ACA55159.1

Gene names

Ordered Locus Names:

CLK_1545 EMBL ACA55159.1

Organism

Clostridium botulinum (strain Loch Maree / Type A3) [Complete proteome] [HAMAP] EMBL ACA55159.1

Taxonomic identifier

498214 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium › Clostridium botulinum › Clostridium botulinum A

Protein attributes

Sequence length	294 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH araC/xylS-type DNA-binding domain. SAAS SAAS018062

Ontologies

Keywords
Ligand	DNA-binding SAAS SAAS018062
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1KV96 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: DC1A74E7FC3FC3D7	FASTA	294	34,231
	10 20 30 40 50 60 METIMLLNNT LEYIERNLHT AINIDDISKV ACSSRYHFQR VFHSLTGFTV TQYIKNRRLT 70 80 90 100 110 120 LAAEELASTD RRIIDIALKY GYESPEAFTK AFKRLHGISP SALKKLNGKI KAFPKISFQI 130 140 150 160 170 180 SIKGECEIIY RIVEKEAFKV FGTGFETTRI NDAAYKEIPE FINKIFKDGT HDRINEALGN 190 200 210 220 230 240 SKGSLLDGFH YDFKENGTRK YMMGYEIPRT EISDEFTILQ VPKLTWAVFE GYGAMPDNLI 250 260 270 280 290 IQDIWRRIYS EWFPSSGFEQ VEGPCIEKNF WNNKKHDKYK CEVWIPVKTK SINW

References

[1]

"Analysis of the Neurotoxin Complex Genes in Clostridium botulinum A1-A4 and B1 Strains: BoNT/A3, /Ba4 and /B1 Clusters Are Located within Plasmids." Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S. PLoS ONE 2:E1271-E1271(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Loch Maree / Type A3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000962 Genomic DNA. Translation: ACA55159.1.
RefSeq	YP_001787482.1. NC_010520.1.
3D structure databases
ProteinModelPortal	B1KV96.
ModBase	Search...
Protein-protein interaction databases
STRING	498214.CLK_1545.
Protein family/group databases
AraC-XylS	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACA55159; ACA55159; CLK_1545.
GeneID	6152899.
KEGG	cbl:CLK_1545.
PATRIC	19389694. VBICloBot822_2460.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2207.
HOGENOM	HOG000085330.
KO	K13653.
OMA	MICINSS.
ProtClustDB	CLSK882407.
Enzyme and pathway databases
BioCyc	CBOT498214:GH05-1575-MONOMER.
Family and domain databases
Gene3D	1.10.10.60. 2 hits.
InterPro	IPR010499. AraC_E-bd. IPR009057. Homeodomain-like. IPR018060. HTH_AraC. IPR018062. HTH_AraC-typ_CS. IPR011256. Reg_factor_effector_bac. IPR020449. Tscrpt_reg_HTH_AraC-type. [Graphical view]
Pfam	PF06445. GyrI-like. 1 hit. PF12833. HTH_18. 1 hit. [Graphical view]
PRINTS	PR00032. HTHARAC.
SMART	SM00871. AraC_E_bind. 1 hit. SM00342. HTH_ARAC. 1 hit. [Graphical view]
SUPFAM	SSF55136. Bac_reg_effector. 1 hit. SSF46689. Homeodomain_like. 2 hits.
PROSITE	PS00041. HTH_ARAC_FAMILY_1. 1 hit. PS01124. HTH_ARAC_FAMILY_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1KV96_CLOBM

Accession

Primary (citable) accession number: B1KV96

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)