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B1KV90

- B1KV90_CLOBM

UniProt

B1KV90 - B1KV90_CLOBM

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Protein
Submitted name: Putative type I site-specific deoxyribonuclease, HsdR family subfamily
Gene
CLK_1539
Organism
Clostridium botulinum (strain Loch Maree / Type A3)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. Type I site-specific deoxyribonuclease activity Source: InterPro

GO - Biological processi

  1. DNA restriction-modification system Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCBOT498214:GH05-2195-MONOMER.

Protein family/group databases

REBASEi17443. CboA3ORF1538P.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative type I site-specific deoxyribonuclease, HsdR family subfamilyImported
Gene namesi
Ordered Locus Names:CLK_1539Imported
OrganismiClostridium botulinum (strain Loch Maree / Type A3)Imported
Taxonomic identifieri498214 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000000722: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi498214.CLK_1539.

Structurei

3D structure databases

ProteinModelPortaliB1KV90.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0610.
HOGENOMiHOG000003518.
KOiK01153.
OMAiIMEANER.
OrthoDBiEOG6JTCB4.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR006935. Helicase/UvrB_dom.
IPR014001. Helicase_ATP-bd.
IPR027417. P-loop_NTPase.
IPR007409. Restrct_endonuc_type1_HsdR_N.
IPR004473. Restrct_endonuc_typeI_HsdR.
IPR022625. TypeI_RM_Rsu_C.
[Graphical view]
PfamiPF12008. EcoR124_C. 1 hit.
PF04313. HSDR_N. 1 hit.
PF04851. ResIII. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 3 hits.
TIGRFAMsiTIGR00348. hsdR. 1 hit.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1KV90-1 [UniParc]FASTAAdd to Basket

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MAYQSEAELE KQLIKQLESK GYNKVKISTE EELIKNFRVQ LNKYNEEKLA    50
GTPLTDKEFE RVMRKVEGKS IFEGAKILRD KWPLKRDDGL EVYIEFFNSK 100
SLCKNIFQVT TQTTVVGKYT NRYDVTLLVN GLPLVQIELK RRGVDFKEAF 150
NQIQRYRKHS YQGLYRYIQI FIVSNGMDTK YFSNSDRDIL YTHTFFWTDE 200
KNQRISKLND FTDTFLERSF ISKIIARYMI INYTEKILMV MRPYQIYAVE 250
ALINRALETN GNGYIWHTTG SGKTLTSFKA SQILSKEPKI KKVFFLVDRK 300
DLDSQTINEF NKFEPKSVDV TDKTSTLIKQ IKDVNKPLIV TTIQKMANAI 350
KSPRYTKIME QYKDEKVAFI IDECHRSQFG SMHIAIEKHF KKAQYFGFTG 400
TPILKENKSQ DGRTTADLFD EMLHSYLIKD AIKDNNVLGF SVEYISTFKG 450
QFDENDDTKV KAIDKKEAFM DDERISQIAQ DIIKNHNKKT KDRQYTAIFA 500
VESIEMLVKY YDKFKKLDHN LKITGIFSYG VNEDAEGKDE HSRDSLEEII 550
KDYNEMFDTK YSTDTFQGYF ANVSKKVKSG QIDILIVVNM FLTGFDSKTL 600
NTLYIDKNLA YHSLIQAYSR TNRVYKSTKP YGNIVCYRNL KKKTDEAIKL 650
FSLTDNANEV LMKSYNHYLE AFKESVLNLY KIVPRPEDVD FIEGEKEKKE 700
FIVAFRELSK ILIKLQTFVE FEFDEDKLLI SEQTYQDFKS KYLAIYDSFK 750
NDEEGKASIL DDIDFGIELM HTDKINVDYI MNLIRNIDFS DKENKEKDIK 800
HIIKELDRAD SEHLRLKVDL LKSFLQEVVP NLTEEDSIDD AYSRFEQVQR 850
TEEIKAFSEQ AAVKEGKLKD YISEYEYSGM LDRKDMGDTI EGSFLKRKKV 900
VNKITTFIKN HVEKFS 916
Length:916
Mass (Da):107,404
Last modified:April 29, 2008 - v1
Checksum:i8504D735F452940C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000962 Genomic DNA. Translation: ACA55536.1.
RefSeqiWP_012343505.1. NC_010520.1.
YP_001787476.1. NC_010520.1.

Genome annotation databases

EnsemblBacteriaiACA55536; ACA55536; CLK_1539.
GeneIDi6154942.
KEGGicbl:CLK_1539.
PATRICi19389680. VBICloBot822_2453.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000962 Genomic DNA. Translation: ACA55536.1 .
RefSeqi WP_012343505.1. NC_010520.1.
YP_001787476.1. NC_010520.1.

3D structure databases

ProteinModelPortali B1KV90.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 498214.CLK_1539.

Protein family/group databases

REBASEi 17443. CboA3ORF1538P.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACA55536 ; ACA55536 ; CLK_1539 .
GeneIDi 6154942.
KEGGi cbl:CLK_1539.
PATRICi 19389680. VBICloBot822_2453.

Phylogenomic databases

eggNOGi COG0610.
HOGENOMi HOG000003518.
KOi K01153.
OMAi IMEANER.
OrthoDBi EOG6JTCB4.

Enzyme and pathway databases

BioCyci CBOT498214:GH05-2195-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
InterProi IPR006935. Helicase/UvrB_dom.
IPR014001. Helicase_ATP-bd.
IPR027417. P-loop_NTPase.
IPR007409. Restrct_endonuc_type1_HsdR_N.
IPR004473. Restrct_endonuc_typeI_HsdR.
IPR022625. TypeI_RM_Rsu_C.
[Graphical view ]
Pfami PF12008. EcoR124_C. 1 hit.
PF04313. HSDR_N. 1 hit.
PF04851. ResIII. 1 hit.
[Graphical view ]
SMARTi SM00487. DEXDc. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 3 hits.
TIGRFAMsi TIGR00348. hsdR. 1 hit.
PROSITEi PS51192. HELICASE_ATP_BIND_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids."
    Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S.
    PLoS ONE 2:E1271-E1271(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Loch Maree / Type A3.

Entry informationi

Entry nameiB1KV90_CLOBM
AccessioniPrimary (citable) accession number: B1KV90
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: September 3, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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