B1KV90 (B1KV90_CLOBM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative type I site-specific deoxyribonuclease, HsdR family subfamily EMBL ACA55536.1

Gene names

Ordered Locus Names:

CLK_1539 EMBL ACA55536.1

Organism

Clostridium botulinum (strain Loch Maree / Type A3) [Complete proteome] [HAMAP] EMBL ACA55536.1

Taxonomic identifier

498214 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium › Clostridium botulinum › Clostridium botulinum A

Protein attributes

Sequence length	916 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA restriction-modification system Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro Type I site-specific deoxyribonuclease activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1KV90 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 8504D735F452940C	FASTA	916	107,404
	10 20 30 40 50 60 MAYQSEAELE KQLIKQLESK GYNKVKISTE EELIKNFRVQ LNKYNEEKLA GTPLTDKEFE 70 80 90 100 110 120 RVMRKVEGKS IFEGAKILRD KWPLKRDDGL EVYIEFFNSK SLCKNIFQVT TQTTVVGKYT 130 140 150 160 170 180 NRYDVTLLVN GLPLVQIELK RRGVDFKEAF NQIQRYRKHS YQGLYRYIQI FIVSNGMDTK 190 200 210 220 230 240 YFSNSDRDIL YTHTFFWTDE KNQRISKLND FTDTFLERSF ISKIIARYMI INYTEKILMV 250 260 270 280 290 300 MRPYQIYAVE ALINRALETN GNGYIWHTTG SGKTLTSFKA SQILSKEPKI KKVFFLVDRK 310 320 330 340 350 360 DLDSQTINEF NKFEPKSVDV TDKTSTLIKQ IKDVNKPLIV TTIQKMANAI KSPRYTKIME 370 380 390 400 410 420 QYKDEKVAFI IDECHRSQFG SMHIAIEKHF KKAQYFGFTG TPILKENKSQ DGRTTADLFD 430 440 450 460 470 480 EMLHSYLIKD AIKDNNVLGF SVEYISTFKG QFDENDDTKV KAIDKKEAFM DDERISQIAQ 490 500 510 520 530 540 DIIKNHNKKT KDRQYTAIFA VESIEMLVKY YDKFKKLDHN LKITGIFSYG VNEDAEGKDE 550 560 570 580 590 600 HSRDSLEEII KDYNEMFDTK YSTDTFQGYF ANVSKKVKSG QIDILIVVNM FLTGFDSKTL 610 620 630 640 650 660 NTLYIDKNLA YHSLIQAYSR TNRVYKSTKP YGNIVCYRNL KKKTDEAIKL FSLTDNANEV 670 680 690 700 710 720 LMKSYNHYLE AFKESVLNLY KIVPRPEDVD FIEGEKEKKE FIVAFRELSK ILIKLQTFVE 730 740 750 760 770 780 FEFDEDKLLI SEQTYQDFKS KYLAIYDSFK NDEEGKASIL DDIDFGIELM HTDKINVDYI 790 800 810 820 830 840 MNLIRNIDFS DKENKEKDIK HIIKELDRAD SEHLRLKVDL LKSFLQEVVP NLTEEDSIDD 850 860 870 880 890 900 AYSRFEQVQR TEEIKAFSEQ AAVKEGKLKD YISEYEYSGM LDRKDMGDTI EGSFLKRKKV 910 VNKITTFIKN HVEKFS

References

[1]

"Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids." Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S. PLoS ONE 2:E1271-E1271(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Loch Maree / Type A3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000962 Genomic DNA. Translation: ACA55536.1.
RefSeq	YP_001787476.1. NC_010520.1.
3D structure databases
ProteinModelPortal	B1KV90.
ModBase	Search...
Protein-protein interaction databases
STRING	498214.CLK_1539.
Protein family/group databases
REBASE	17443. CboA3ORF1538P.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACA55536; ACA55536; CLK_1539.
GeneID	6154942.
KEGG	cbl:CLK_1539.
PATRIC	19389680. VBICloBot822_2453.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0610.
HOGENOM	HOG000003518.
KO	K01153.
OMA	NRYDVTI.
ProtClustDB	CLSK884469.
Enzyme and pathway databases
BioCyc	CBOT498214:GH05-2195-MONOMER.
Family and domain databases
InterPro	IPR006935. Helicase/UvrB_dom. IPR014001. Helicase_ATP-bd. IPR027417. P-loop_NTPase. IPR007409. Restrct_endonuc_type1_HsdR_N. IPR004473. Restrct_endonuc_typeI_HsdR. IPR022625. TypeI_RM_Rsu_C. [Graphical view]
Pfam	PF12008. EcoR124_C. 1 hit. PF04313. HSDR_N. 1 hit. PF04851. ResIII. 1 hit. [Graphical view]
SMART	SM00487. DEXDc. 1 hit. [Graphical view]
SUPFAM	SSF52540. SSF52540. 2 hits.
TIGRFAMs	TIGR00348. hsdR. 1 hit.
PROSITE	PS51192. HELICASE_ATP_BIND_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1KV90_CLOBM

Accession

Primary (citable) accession number: B1KV90

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	May 29, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)