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B1KV90

- B1KV90_CLOBM

UniProt

B1KV90 - B1KV90_CLOBM

Protein
Submitted name:

Putative type I site-specific deoxyribonuclease, HsdR family subfamily

Gene

CLK_1539

Organism
Clostridium botulinum (strain Loch Maree / Type A3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (29 Apr 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. Type I site-specific deoxyribonuclease activity Source: InterPro

    GO - Biological processi

    1. DNA restriction-modification system Source: InterPro

    Enzyme and pathway databases

    BioCyciCBOT498214:GH05-2195-MONOMER.

    Protein family/group databases

    REBASEi17443. CboA3ORF1538P.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative type I site-specific deoxyribonuclease, HsdR family subfamilyImported
    Gene namesi
    Ordered Locus Names:CLK_1539Imported
    OrganismiClostridium botulinum (strain Loch Maree / Type A3)Imported
    Taxonomic identifieri498214 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
    ProteomesiUP000000722: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi498214.CLK_1539.

    Structurei

    3D structure databases

    ProteinModelPortaliB1KV90.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0610.
    HOGENOMiHOG000003518.
    KOiK01153.
    OMAiIMEANER.
    OrthoDBiEOG6JTCB4.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    InterProiIPR006935. Helicase/UvrB_dom.
    IPR014001. Helicase_ATP-bd.
    IPR027417. P-loop_NTPase.
    IPR007409. Restrct_endonuc_type1_HsdR_N.
    IPR004473. Restrct_endonuc_typeI_HsdR.
    IPR022625. TypeI_RM_Rsu_C.
    [Graphical view]
    PfamiPF12008. EcoR124_C. 1 hit.
    PF04313. HSDR_N. 1 hit.
    PF04851. ResIII. 1 hit.
    [Graphical view]
    SMARTiSM00487. DEXDc. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 3 hits.
    TIGRFAMsiTIGR00348. hsdR. 1 hit.
    PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B1KV90-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAYQSEAELE KQLIKQLESK GYNKVKISTE EELIKNFRVQ LNKYNEEKLA    50
    GTPLTDKEFE RVMRKVEGKS IFEGAKILRD KWPLKRDDGL EVYIEFFNSK 100
    SLCKNIFQVT TQTTVVGKYT NRYDVTLLVN GLPLVQIELK RRGVDFKEAF 150
    NQIQRYRKHS YQGLYRYIQI FIVSNGMDTK YFSNSDRDIL YTHTFFWTDE 200
    KNQRISKLND FTDTFLERSF ISKIIARYMI INYTEKILMV MRPYQIYAVE 250
    ALINRALETN GNGYIWHTTG SGKTLTSFKA SQILSKEPKI KKVFFLVDRK 300
    DLDSQTINEF NKFEPKSVDV TDKTSTLIKQ IKDVNKPLIV TTIQKMANAI 350
    KSPRYTKIME QYKDEKVAFI IDECHRSQFG SMHIAIEKHF KKAQYFGFTG 400
    TPILKENKSQ DGRTTADLFD EMLHSYLIKD AIKDNNVLGF SVEYISTFKG 450
    QFDENDDTKV KAIDKKEAFM DDERISQIAQ DIIKNHNKKT KDRQYTAIFA 500
    VESIEMLVKY YDKFKKLDHN LKITGIFSYG VNEDAEGKDE HSRDSLEEII 550
    KDYNEMFDTK YSTDTFQGYF ANVSKKVKSG QIDILIVVNM FLTGFDSKTL 600
    NTLYIDKNLA YHSLIQAYSR TNRVYKSTKP YGNIVCYRNL KKKTDEAIKL 650
    FSLTDNANEV LMKSYNHYLE AFKESVLNLY KIVPRPEDVD FIEGEKEKKE 700
    FIVAFRELSK ILIKLQTFVE FEFDEDKLLI SEQTYQDFKS KYLAIYDSFK 750
    NDEEGKASIL DDIDFGIELM HTDKINVDYI MNLIRNIDFS DKENKEKDIK 800
    HIIKELDRAD SEHLRLKVDL LKSFLQEVVP NLTEEDSIDD AYSRFEQVQR 850
    TEEIKAFSEQ AAVKEGKLKD YISEYEYSGM LDRKDMGDTI EGSFLKRKKV 900
    VNKITTFIKN HVEKFS 916
    Length:916
    Mass (Da):107,404
    Last modified:April 29, 2008 - v1
    Checksum:i8504D735F452940C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000962 Genomic DNA. Translation: ACA55536.1.
    RefSeqiWP_012343505.1. NC_010520.1.
    YP_001787476.1. NC_010520.1.

    Genome annotation databases

    EnsemblBacteriaiACA55536; ACA55536; CLK_1539.
    GeneIDi6154942.
    KEGGicbl:CLK_1539.
    PATRICi19389680. VBICloBot822_2453.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000962 Genomic DNA. Translation: ACA55536.1 .
    RefSeqi WP_012343505.1. NC_010520.1.
    YP_001787476.1. NC_010520.1.

    3D structure databases

    ProteinModelPortali B1KV90.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 498214.CLK_1539.

    Protein family/group databases

    REBASEi 17443. CboA3ORF1538P.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACA55536 ; ACA55536 ; CLK_1539 .
    GeneIDi 6154942.
    KEGGi cbl:CLK_1539.
    PATRICi 19389680. VBICloBot822_2453.

    Phylogenomic databases

    eggNOGi COG0610.
    HOGENOMi HOG000003518.
    KOi K01153.
    OMAi IMEANER.
    OrthoDBi EOG6JTCB4.

    Enzyme and pathway databases

    BioCyci CBOT498214:GH05-2195-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    InterProi IPR006935. Helicase/UvrB_dom.
    IPR014001. Helicase_ATP-bd.
    IPR027417. P-loop_NTPase.
    IPR007409. Restrct_endonuc_type1_HsdR_N.
    IPR004473. Restrct_endonuc_typeI_HsdR.
    IPR022625. TypeI_RM_Rsu_C.
    [Graphical view ]
    Pfami PF12008. EcoR124_C. 1 hit.
    PF04313. HSDR_N. 1 hit.
    PF04851. ResIII. 1 hit.
    [Graphical view ]
    SMARTi SM00487. DEXDc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 3 hits.
    TIGRFAMsi TIGR00348. hsdR. 1 hit.
    PROSITEi PS51192. HELICASE_ATP_BIND_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids."
      Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S.
      PLoS ONE 2:E1271-E1271(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Loch Maree / Type A3Imported.

    Entry informationi

    Entry nameiB1KV90_CLOBM
    AccessioniPrimary (citable) accession number: B1KV90
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 29, 2008
    Last sequence update: April 29, 2008
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3