B1KRM5 (B1KRM5_SHEWM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Trimethylamine-N-oxide reductase TorA EMBL ACA87790.1

Gene names

Ordered Locus Names:

Swoo_3526

Organism

Shewanella woodyi (strain ATCC 51908 / MS32) [Complete proteome] [HAMAP] EMBL ACA87790.1

Taxonomic identifier

392500 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	830 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ACA87790.1
Ligand	Molybdenum SAAS SAAS006657
Molecular function	Oxidoreductase SAAS SAAS006655
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	electron carrier activity Inferred from electronic annotation. Source: InterPro molybdenum ion binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on other nitrogenous compounds as donors Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 32	32	Potential EMBL ACA87790.1
	Chain	33 – 830	798	Potential EMBL ACA87790.1		PRO_5000317528

Sequences

	Sequence		Length	Mass (Da)
	B1KRM5 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 30A04C8800199731	FASTA	830	92,158
	10 20 30 40 50 60 MKRRDFLKGL VSTSYVVLSG ASVLAPLNAL AAAGAKKDDG WLTTGSHFGA FKMKRKNGVI 70 80 90 100 110 120 DQVIPFDSDK YPTDMINGVK GLVYNPSRVR YPMVRLDFLL NGHKSNTSQR GDFRFVRVTW 130 140 150 160 170 180 DKALHLLKDS LDEVQTKYGP SGLHAGQTGW RATGQLHSCT SHMQRAIGMH GNFVKKIGDY 190 200 210 220 230 240 STGAGQTILP YILGSTEVYA QGTSWSLILE ESDTIILWSN DPYKNLQVGW NAETHESYAY 250 260 270 280 290 300 LAQLKEKVKQ GKIRVISIDP VVTKTQKYLG CEQLYVNPQT DVALMLGIAH EMVTKNLHDT 310 320 330 340 350 360 KFIEGYSLGF DQFLPYLMGE SDGVAKTPEW ASEITSVSPE IIRDLAKVMT KGRTQMLMGW 370 380 390 400 410 420 CIQRQQHGEQ PYWMAAVLAT MIGQIGLPGG GISYGHHYSS IGVPSSGAAA PGAFPRNLDE 430 440 450 460 470 480 DQKPIFDSND FKGASSTIPV ARWIDSILEP GKTIDANGSK VTFPDIKMMV FSGNNPWNHH 490 500 510 520 530 540 QDRNRMKQAF HKLECVVSID VNWTATCRFS DIVLPACTTF ERNDIDIYGS YANRGLLAMQ 550 560 570 580 590 600 KMVEPLYESL SDFEIFTRFA AVLGKEKEYT RGMSEKDWLV KLYNDCKAAN AGKFEMPDFE 610 620 630 640 650 660 GFWKEGYVYF GEGKPWTRHA DFREDPEINP LGTPSGLIEI FSRKIAQYGY DDCPGHPTWM 670 680 690 700 710 720 EKAERSHGGP GSNKFPVWMQ SCHPDKRLHS QMCESAEFRE TYAVKGREPV YMSPADAKQR 730 740 750 760 770 780 GIKSGDIVRV FNDRGQLLAG AVVSNNYPQG VIRIQEGAWY GPVGADGSKE GGAKVGALCS 790 800 810 820 830 YGDPNTLTMD IGTSKLAQAC SAYTCLVDFE KYKGKVPEVS SFSGPIETQI

References

[1]

"Complete sequence of Shewanella woodyi ATCC 51908." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Zhao J.-S., Richardson P. Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51908 / MS32.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000961 Genomic DNA. Translation: ACA87790.1.
RefSeq	YP_001761885.1. NC_010506.1.
3D structure databases
ProteinModelPortal	B1KRM5.
SMR	B1KRM5. Positions 38-830.
ModBase	Search...
Protein-protein interaction databases
STRING	B1KRM5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6117858.
GenomeReviews	Gene locus Swoo_3526 in contig CP000961_GR.
KEGG	swd:Swoo_3526.
PATRIC	23609659. VBISheWoo126588_3631.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG304064.
OMA	NHMIRAI.
ProtClustDB	PRK15102.
Family and domain databases
InterPro	IPR009010. Asp_de-COase-like_fold. IPR006657. MoPterin_dinucl-bd_dom. IPR006656. Mopterin_OxRdtase. IPR006655. Mopterin_OxRdtase_prok_CS. [Graphical view]
Gene3D	G3DSA:2.40.40.20. Asp_decarboxylase-like_fold. 1 hit.
KO	K07811.
Pfam	PF00384. Molybdopterin. 1 hit. PF01568. Molydop_binding. 1 hit. [Graphical view]
SUPFAM	SSF50692. Asp_decarb_fold. 1 hit.
PROSITE	PS00490. MOLYBDOPTERIN_PROK_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1KRM5_SHEWM

Accession

Primary (citable) accession number: B1KRM5

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)