B1KRF5 (B1KRF5_SHEWM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Phosphoribosylaminoimidazole-succinocarboxamide synthase HAMAP MF_00137
EC=6.3.2.6 HAMAP MF_00137

Alternative name(s):
SAICAR synthetase HAMAP MF_00137

Gene names

Name:	purC HAMAP MF_00137
Ordered Locus Names:	Swoo_2078

Organism

Shewanella woodyi (strain ATCC 51908 / MS32) [Complete proteome] [HAMAP] EMBL ACA86362.1

Taxonomic identifier

392500 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	368 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + L-aspartate = ADP + phosphate + (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate. HAMAP MF_00137
Pathway	Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate: step 1/2. HAMAP MF_00137
Sequence similarities	Belongs to the SAICAR synthetase family. HAMAP MF_00137

Ontologies

Keywords
Biological process	Purine biosynthesis HAMAP MF_00137
Ligand	ATP-binding HAMAP MF_00137 Nucleotide-binding
Molecular function	Ligase HAMAP MF_00137 EMBL ACA86362.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	purine nucleotide biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW phosphoribosylaminoimidazolesuccinocarboxamide synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1KRF5 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 42A5ECEE41D00ABE	FASTA	368	41,440
	10 20 30 40 50 60 MNLSNKVLAV NDDLPIRTDK AVHSGKVRSV YWLTEQDSAR LIQQKGYDVP VDTPLAIMVI 70 80 90 100 110 120 SDRISAFDCI WQGEGGLNGV PGKGAALNAI SNHWFKLFKE KGLADSHILD VPHPFVWIVQ 130 140 150 160 170 180 KAQPVMVEAI ARQYITGSMW RAYSSGEREF CGIRLPEGLE KDQKLPEILI TPSTKGVLTG 190 200 210 220 230 240 LEGVPEADDV NVSRADLERH LEGFNFRNLS DIDLYEKLLK EGFAVISDAL DAQDQIFIDT 250 260 270 280 290 300 KFEFGYVKNA NGQEKLIYMD EVGTPDSSRI WDGPAHRDGK IIEKSKEGFR QWLLNHFPDP 310 320 330 340 350 360 DILLNKERMP ERFALAADNK LPQSVMMDIS NTYVGIAEKV IGKKLTISED PKQEIIDILR NEYQLITD

References

[1]

"Complete sequence of Shewanella woodyi ATCC 51908." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Zhao J.-S., Richardson P. Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51908 / MS32.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000961 Genomic DNA. Translation: ACA86362.1.
RefSeq	YP_001760457.1. NC_010506.1.
3D structure databases
ProteinModelPortal	B1KRF5.
ModBase	Search...
Protein-protein interaction databases
STRING	B1KRF5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6116341.
GenomeReviews	Gene locus Swoo_2078 in contig CP000961_GR.
KEGG	swd:Swoo_2078.
PATRIC	23606561. VBISheWoo126588_2148.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG555040.
OMA	SSRIWDG.
ProtClustDB	PRK13960.
Family and domain databases
HAMAP	MF_00137. SAICAR_synth. [Tree]
InterPro	IPR013816. ATP_grasp_subdomain_2. IPR014106. PurC_vibrio. IPR001636. SAICAR_synth. [Graphical view]
Gene3D	G3DSA:3.30.470.20. ATP_grasp_subdomain_2. 1 hit.
KO	K01923.
PANTHER	PTHR11609. SAICAR_synt. 1 hit.
Pfam	PF01259. SAICAR_synt. 1 hit. [Graphical view]
TIGRFAMs	TIGR02735. PurC_vibrio. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B1KRF5_SHEWM

Accession

Primary (citable) accession number: B1KRF5

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)