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B1KPK7 (B1KPK7_SHEWM) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Swoo_1876 EMBL ACA86160.1
OrganismShewanella woodyi (strain ATCC 51908 / MS32) [Complete proteome] [HAMAP] EMBL ACA86160.1
Taxonomic identifier392500 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length120 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B1KPK7 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 1D8420AB6C66E189

FASTA12013,242
        10         20         30         40         50         60 
MRWVDICDES ALPRFGGIAA WCENRAVAIF NLGEQGLYAM SNTDPATGVS LLSRGLICEL 

        70         80         90        100        110        120 
EGDIWVASPL HKQHYSLTSG ECIEDESLRV QLYPISCEGG RVWLQTASEK SEPRVLRSAI 

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References

[1]"Complete sequence of Shewanella woodyi ATCC 51908."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Lykidis A., Zhao J.-S., Richardson P.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51908 / MS32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000961 Genomic DNA. Translation: ACA86160.1.
RefSeqYP_001760255.1. NC_010506.1.

3D structure databases

ProteinModelPortalB1KPK7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING392500.Swoo_1876.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA86160; ACA86160; Swoo_1876.
GeneID6116139.
KEGGswd:Swoo_1876.
PATRIC23606151. VBISheWoo126588_1943.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2146.
HOGENOMHOG000128543.
KOK00363.
OMAPLHKQHY.
OrthoDBEOG6PP9RC.
ProtClustDBCLSK958264.

Enzyme and pathway databases

BioCycSWOO392500:GI2C-1922-MONOMER.

Family and domain databases

Gene3D2.102.10.10. 1 hit.
InterProIPR012748. Nitri_red_NirD.
IPR017881. Nitrite_Rdtase_lsu_NirD_bac.
IPR017941. Rieske_2Fe-2S.
[Graphical view]
SUPFAMSSF50022. SSF50022. 1 hit.
TIGRFAMsTIGR02378. nirD_assim_sml. 1 hit.
PROSITEPS51300. NIRD. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1KPK7_SHEWM
AccessionPrimary (citable) accession number: B1KPK7
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: November 13, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)