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B1KNT0

- LPXB_SHEWM

UniProt

B1KNT0 - LPXB_SHEWM

Protein

Lipid-A-disaccharide synthase

Gene

lpxB

Organism
Shewanella woodyi (strain ATCC 51908 / MS32)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (29 Apr 2008)
      Previous versions | rss
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    Functioni

    Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.UniRule annotation

    Catalytic activityi

    UDP-2,3-bis(3-hydroxytetradecanoyl)glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate = UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6-beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate.UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. lipid-A-disaccharide synthase activity Source: UniProtKB-EC

    GO - Biological processi

    1. lipid A biosynthetic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Lipid A biosynthesis, Lipid biosynthesis, Lipid metabolism

    Enzyme and pathway databases

    BioCyciSWOO392500:GI2C-3370-MONOMER.
    UniPathwayiUPA00359; UER00481.

    Protein family/group databases

    CAZyiGT19. Glycosyltransferase Family 19.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Lipid-A-disaccharide synthaseUniRule annotation (EC:2.4.1.182UniRule annotation)
    Gene namesi
    Name:lpxBUniRule annotation
    Ordered Locus Names:Swoo_3268
    OrganismiShewanella woodyi (strain ATCC 51908 / MS32)
    Taxonomic identifieri392500 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000002168: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 384384Lipid-A-disaccharide synthasePRO_1000123065Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi392500.Swoo_3268.

    Structurei

    3D structure databases

    ProteinModelPortaliB1KNT0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the LpxB family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0763.
    HOGENOMiHOG000018003.
    KOiK00748.
    OMAiVSPITYR.
    OrthoDBiEOG6FBWZR.

    Family and domain databases

    HAMAPiMF_00392. LpxB.
    InterProiIPR003835. Glyco_trans_19.
    [Graphical view]
    PfamiPF02684. LpxB. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00215. lpxB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B1KNT0-1 [UniParc]FASTAAdd to Basket

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    MSEPTHPTFA MVAGELSGDI LGAGLIKALK KQYPNARFIG IGGPKMDALG    50
    FESLFSFEEL AVMGIVEVLA RLPRLLKVRK TLIDEICAIK PDCFIGIDAP 100
    DFNIGLELKL KDRGIKTVHY VSPSVWAWRP KRIFKIAKAT NMVLSLLPFE 150
    KAFYDRHDVP CTFVGHTLAD DIPMSSDKSA ARQQLGLDPE LEYLAVLPGS 200
    RGGELKQLAE PFVKAASIIK QRYPDIHFVT PLVNAKRREQ FEEALKLYAP 250
    NLEITLVEGQ SREVMAAADC ILLASGTATL EAMLVKRPMV VAYRVNAMTY 300
    SIAKRMMQID KYSLPNLLAG EDLVTELIQE NCTPELIASS VCEQLDRDFA 350
    PLKEKFIKLH EQLRCNASER AADAVVKLIN SEAS 384
    Length:384
    Mass (Da):42,576
    Last modified:April 29, 2008 - v1
    Checksum:i3C754264517CAA30
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000961 Genomic DNA. Translation: ACA87538.1.
    RefSeqiWP_012325874.1. NC_010506.1.
    YP_001761633.1. NC_010506.1.

    Genome annotation databases

    EnsemblBacteriaiACA87538; ACA87538; Swoo_3268.
    GeneIDi6117587.
    KEGGiswd:Swoo_3268.
    PATRICi23609101. VBISheWoo126588_3363.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000961 Genomic DNA. Translation: ACA87538.1 .
    RefSeqi WP_012325874.1. NC_010506.1.
    YP_001761633.1. NC_010506.1.

    3D structure databases

    ProteinModelPortali B1KNT0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 392500.Swoo_3268.

    Protein family/group databases

    CAZyi GT19. Glycosyltransferase Family 19.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACA87538 ; ACA87538 ; Swoo_3268 .
    GeneIDi 6117587.
    KEGGi swd:Swoo_3268.
    PATRICi 23609101. VBISheWoo126588_3363.

    Phylogenomic databases

    eggNOGi COG0763.
    HOGENOMi HOG000018003.
    KOi K00748.
    OMAi VSPITYR.
    OrthoDBi EOG6FBWZR.

    Enzyme and pathway databases

    UniPathwayi UPA00359 ; UER00481 .
    BioCyci SWOO392500:GI2C-3370-MONOMER.

    Family and domain databases

    HAMAPi MF_00392. LpxB.
    InterProi IPR003835. Glyco_trans_19.
    [Graphical view ]
    Pfami PF02684. LpxB. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00215. lpxB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 51908 / MS32.

    Entry informationi

    Entry nameiLPXB_SHEWM
    AccessioniPrimary (citable) accession number: B1KNT0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 14, 2009
    Last sequence update: April 29, 2008
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3