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B1KN32

- B1KN32_SHEWM

UniProt

B1KN32 - B1KN32_SHEWM

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Protein

Glutamate decarboxylase

Gene

Swoo_4739

Organism
Shewanella woodyi (strain ATCC 51908 / MS32)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSWOO392500:GI2C-4900-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:Swoo_4739Imported
OrganismiShewanella woodyi (strain ATCC 51908 / MS32)Imported
Taxonomic identifieri392500 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000002168: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi392500.Swoo_4739.

Structurei

3D structure databases

ProteinModelPortaliB1KN32.
SMRiB1KN32. Positions 31-448.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiPTFQINF.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

B1KN32-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPLHSKDTVR DDLLDDIYSS ADLALSMPKY KMPEQEHDSR HVYQVIHDEL
60 70 80 90 100
MMDGNSRQNL ATFCQTWVED EVHKLMDECI DKNMIDKDEY PQTAELEARC
110 120 130 140 150
VHMLADLWHS PDAENTLGCS TTGSSEAAML GGMALKWAWR EKMRKLGKPT
160 170 180 190 200
DKPNLICGPV QVCWHKFARY WDIELREIPM EGDRLIMTPE EVIKRCDENT
210 220 230 240 250
IGVVPTLGVT FTCQYEPVKA VHEALDQLQK DTGLDIPMHI DAASGGFLAP
260 270 280 290 300
FCDPDLEWDF RLPRVKSINA SGHKFGLSPL GVGWVIWRDA SALDKDLIFN
310 320 330 340 350
VNYLGGNMPT FALNFSRPGG QIVAQYYNFL RLGREGYRKI HQACYDTAIY
360 370 380 390 400
LSGEIEKMGM FDIIYDGQGG IPAMSWSLKE GVEPGFNLFD LSDRIRSRGW
410 420 430 440 450
QIAAYAMPPK REDLVIMRIL VRHGFSRDQA DLLVADLQHC VDFFAKHPIS
460
HSSDEAESAG FNHG
Length:464
Mass (Da):52,582
Last modified:April 29, 2008 - v1
Checksum:iFAEBB2155FC86A3F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000961 Genomic DNA. Translation: ACA88989.1.
RefSeqiYP_001763084.1. NC_010506.1.

Genome annotation databases

EnsemblBacteriaiACA88989; ACA88989; Swoo_4739.
GeneIDi6119116.
KEGGiswd:Swoo_4739.
PATRICi23612235. VBISheWoo126588_4876.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000961 Genomic DNA. Translation: ACA88989.1 .
RefSeqi YP_001763084.1. NC_010506.1.

3D structure databases

ProteinModelPortali B1KN32.
SMRi B1KN32. Positions 31-448.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 392500.Swoo_4739.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACA88989 ; ACA88989 ; Swoo_4739 .
GeneIDi 6119116.
KEGGi swd:Swoo_4739.
PATRICi 23612235. VBISheWoo126588_4876.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000070228.
KOi K01580.
OMAi PTFQINF.
OrthoDBi EOG6TFCPW.

Enzyme and pathway databases

BioCyci SWOO392500:GI2C-4900-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51908 / MS32Imported.

Entry informationi

Entry nameiB1KN32_SHEWM
AccessioniPrimary (citable) accession number: B1KN32
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: October 29, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3