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B1KN32

- B1KN32_SHEWM

UniProt

B1KN32 - B1KN32_SHEWM

Protein

Glutamate decarboxylase

Gene

Swoo_4739

Organism
Shewanella woodyi (strain ATCC 51908 / MS32)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (29 Apr 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciSWOO392500:GI2C-4900-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Ordered Locus Names:Swoo_4739Imported
    OrganismiShewanella woodyi (strain ATCC 51908 / MS32)Imported
    Taxonomic identifieri392500 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000002168: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi392500.Swoo_4739.

    Structurei

    3D structure databases

    ProteinModelPortaliB1KN32.
    SMRiB1KN32. Positions 31-448.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000070228.
    KOiK01580.
    OMAiPTFQINF.
    OrthoDBiEOG6TFCPW.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B1KN32-1 [UniParc]FASTAAdd to Basket

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    MPLHSKDTVR DDLLDDIYSS ADLALSMPKY KMPEQEHDSR HVYQVIHDEL    50
    MMDGNSRQNL ATFCQTWVED EVHKLMDECI DKNMIDKDEY PQTAELEARC 100
    VHMLADLWHS PDAENTLGCS TTGSSEAAML GGMALKWAWR EKMRKLGKPT 150
    DKPNLICGPV QVCWHKFARY WDIELREIPM EGDRLIMTPE EVIKRCDENT 200
    IGVVPTLGVT FTCQYEPVKA VHEALDQLQK DTGLDIPMHI DAASGGFLAP 250
    FCDPDLEWDF RLPRVKSINA SGHKFGLSPL GVGWVIWRDA SALDKDLIFN 300
    VNYLGGNMPT FALNFSRPGG QIVAQYYNFL RLGREGYRKI HQACYDTAIY 350
    LSGEIEKMGM FDIIYDGQGG IPAMSWSLKE GVEPGFNLFD LSDRIRSRGW 400
    QIAAYAMPPK REDLVIMRIL VRHGFSRDQA DLLVADLQHC VDFFAKHPIS 450
    HSSDEAESAG FNHG 464
    Length:464
    Mass (Da):52,582
    Last modified:April 29, 2008 - v1
    Checksum:iFAEBB2155FC86A3F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000961 Genomic DNA. Translation: ACA88989.1.
    RefSeqiYP_001763084.1. NC_010506.1.

    Genome annotation databases

    EnsemblBacteriaiACA88989; ACA88989; Swoo_4739.
    GeneIDi6119116.
    KEGGiswd:Swoo_4739.
    PATRICi23612235. VBISheWoo126588_4876.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000961 Genomic DNA. Translation: ACA88989.1 .
    RefSeqi YP_001763084.1. NC_010506.1.

    3D structure databases

    ProteinModelPortali B1KN32.
    SMRi B1KN32. Positions 31-448.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 392500.Swoo_4739.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACA88989 ; ACA88989 ; Swoo_4739 .
    GeneIDi 6119116.
    KEGGi swd:Swoo_4739.
    PATRICi 23612235. VBISheWoo126588_4876.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000070228.
    KOi K01580.
    OMAi PTFQINF.
    OrthoDBi EOG6TFCPW.

    Enzyme and pathway databases

    BioCyci SWOO392500:GI2C-4900-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 51908 / MS32Imported.

    Entry informationi

    Entry nameiB1KN32_SHEWM
    AccessioniPrimary (citable) accession number: B1KN32
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 29, 2008
    Last sequence update: April 29, 2008
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3