B1KMS8 (B1KMS8_SHEWM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Diguanylate cyclase with PAS/PAC sensor EMBL ACA87456.1

Gene names

Ordered Locus Names:

Swoo_3185

Organism

Shewanella woodyi (strain ATCC 51908 / MS32) [Complete proteome] [HAMAP] EMBL ACA87456.1

Taxonomic identifier

392500 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	482 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro signal transducer activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1KMS8 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 361AB013F99122C4	FASTA	482	55,277
	10 20 30 40 50 60 MHRMLKRQLK KAYPKGAPDN IEFEQFVKLI DQAYFSMSEE LSITERSLDL SCEELKQRND 70 80 90 100 110 120 TLSGILDALP DMSMWLDQEG VIRDIRVGEF NPPLVSKEDE HSSISSLHFF KNSIPLQHFL 130 140 150 160 170 180 IDYKQIGSKS GELELSCDSF TYHVEAKLTS VSKQRWLLVI RDISLRRKLI EMQTERMDQI 190 200 210 220 230 240 KRTQKQLQGL INAAPTGILI TDESKKLVMV NEFICQKLSL TTDELLGRNP LTFIAKKYRL 250 260 270 280 290 300 EYLSEIQKHI SYDDTILDSR MDLTMTLPSN ETIKVEMAFS TLIFEKKKLV ITAITDITER 310 320 330 340 350 360 KRLETQLRIL ASTDPLTGAY NRRCFNELSQ KSMSSTERQE QEFTILLIDL DFFKSINDKF 370 380 390 400 410 420 GHAAGDDVLI ETVKAINTCI RESDILGRYG GEEFVVALPN SDNKKAREVA NRIRLCIENM 430 440 450 460 470 480 VVKTQGHDIK LTASIGLATS SGGHQLEKQI NQADTYLYYA KDNGRNQVVD HKIYHANSKL CR

References

[1]

"Complete sequence of Shewanella woodyi ATCC 51908." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Zhao J.-S., Richardson P. Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51908 / MS32.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000961 Genomic DNA. Translation: ACA87456.1.
RefSeq	YP_001761551.1. NC_010506.1.
3D structure databases
ProteinModelPortal	B1KMS8.
ModBase	Search...
Protein-protein interaction databases
STRING	B1KMS8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6117504.
GenomeReviews	Gene locus Swoo_3185 in contig CP000961_GR.
KEGG	swd:Swoo_3185.
PATRIC	23608931. VBISheWoo126588_3278.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG683188.
OMA	CIVEDIS.
ProtClustDB	CLSK218112.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR000160. Diguanylate_cyclase-pred. IPR000014. PAS. IPR013767. PAS_fold. [Graphical view]
Pfam	PF00990. GGDEF. 1 hit. PF00989. PAS. 1 hit. [Graphical view]
SMART	SM00267. GGDEF. 1 hit. SM00091. PAS. 1 hit. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit. TIGR00229. Sensory_box. 1 hit.
PROSITE	PS50887. GGDEF. 1 hit. PS50112. PAS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1KMS8_SHEWM

Accession

Primary (citable) accession number: B1KMS8

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)