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B1KMM8

- B1KMM8_SHEWM

UniProt

B1KMM8 - B1KMM8_SHEWM

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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Swoo_3135

Organism
Shewanella woodyi (strain ATCC 51908 / MS32)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSWOO392500:GI2C-3237-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:Swoo_3135Imported
OrganismiShewanella woodyi (strain ATCC 51908 / MS32)Imported
Taxonomic identifieri392500 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000002168: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi392500.Swoo_3135.

Structurei

3D structure databases

ProteinModelPortaliB1KMM8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiARYFRQP.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

B1KMM8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSMTQRRATA SEEALLRIFT VPEAPDSTLS VIEQNISQNL MGFLQESVVA
60 70 80 90 100
VEKPLSEIER DFQQHQIPSA PQFVSDYADD MMKTLVAHSV HTSAPSFIGH
110 120 130 140 150
MTSALPYFVL PLSKMMVGLN QNLVKIETSK AFTPLERQVL GMMHHLIYSE
160 170 180 190 200
SDEFYQSWMH SANYSLGAFC SGGTVANITA LWTARNQLLK ADGDFKGVSA
210 220 230 240 250
QGLVKGLRHY GYDDLAILVS QRGHYSLAKT ADLLGIGREN IIQIPTSSDN
260 270 280 290 300
KVDVSKMREM AAKLNDDNIK VMAIVGVAGT TETGNIDPLD ELATLASELN
310 320 330 340 350
CHFHVDAAWG GASLLSNKYR HLLKGIERAD SVTIDAHKQM YVPMGAGMVI
360 370 380 390 400
FKDPAFANAI KHHAEYILRK GSKDLGSQTL EGSRPGMAML VHACLQVIGR
410 420 430 440 450
DGYEILINNS LEKARYFADL IKQHQDFELV SEPELCLLTY RYVPKSVQMA
460 470 480 490 500
MAQARENKDV QSLIEFNRLL DGLTKFVQKR QREQGTSFVS RTRINPEAGI
510 520 530 540 550
VDIKSVVFRV VLANPLTTHE ILAQVLSEQS EIANQDNKFL PQLLQLANLK

N
Length:551
Mass (Da):61,167
Last modified:April 29, 2008 - v1
Checksum:i94F2955B9712082B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000961 Genomic DNA. Translation: ACA87406.1.
RefSeqiWP_012325742.1. NC_010506.1.
YP_001761501.1. NC_010506.1.

Genome annotation databases

EnsemblBacteriaiACA87406; ACA87406; Swoo_3135.
GeneIDi6117454.
KEGGiswd:Swoo_3135.
PATRICi23608829. VBISheWoo126588_3227.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000961 Genomic DNA. Translation: ACA87406.1 .
RefSeqi WP_012325742.1. NC_010506.1.
YP_001761501.1. NC_010506.1.

3D structure databases

ProteinModelPortali B1KMM8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 392500.Swoo_3135.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACA87406 ; ACA87406 ; Swoo_3135 .
GeneIDi 6117454.
KEGGi swd:Swoo_3135.
PATRICi 23608829. VBISheWoo126588_3227.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000282553.
KOi K01580.
OMAi ARYFRQP.
OrthoDBi EOG6MSRZP.

Enzyme and pathway databases

BioCyci SWOO392500:GI2C-3237-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51908 / MS32Imported.

Entry informationi

Entry nameiB1KMM8_SHEWM
AccessioniPrimary (citable) accession number: B1KMM8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: October 1, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3