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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Swoo_3135

Organism
Shewanella woodyi (strain ATCC 51908 / MS32)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseUniRule annotation
LigandPyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:Swoo_3135Imported
OrganismiShewanella woodyi (strain ATCC 51908 / MS32)Imported
Taxonomic identifieri392500 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000002168 Componenti: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei338N6-(pyridoxal phosphate)lysineUniRule annotation1

Interactioni

Protein-protein interaction databases

STRINGi392500.Swoo_3135

Structurei

3D structure databases

ProteinModelPortaliB1KMM8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DY8 Bacteria
COG0076 LUCA
HOGENOMiHOG000282553
KOiK01580
OMAiFHKHFFQ
OrthoDBiPOG091H05DC

Family and domain databases

Gene3Di3.40.640.10, 1 hit
InterProiView protein in InterPro
IPR022517 Asp_decarboxylase_pyridox
IPR002129 PyrdxlP-dep_de-COase
IPR015424 PyrdxlP-dep_Trfase
IPR015421 PyrdxlP-dep_Trfase_major
PfamiView protein in Pfam
PF00282 Pyridoxal_deC, 1 hit
SUPFAMiSSF53383 SSF53383, 1 hit
TIGRFAMsiTIGR03799 NOD_PanD_pyr, 1 hit

Sequencei

Sequence statusi: Complete.

B1KMM8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSMTQRRATA SEEALLRIFT VPEAPDSTLS VIEQNISQNL MGFLQESVVA
60 70 80 90 100
VEKPLSEIER DFQQHQIPSA PQFVSDYADD MMKTLVAHSV HTSAPSFIGH
110 120 130 140 150
MTSALPYFVL PLSKMMVGLN QNLVKIETSK AFTPLERQVL GMMHHLIYSE
160 170 180 190 200
SDEFYQSWMH SANYSLGAFC SGGTVANITA LWTARNQLLK ADGDFKGVSA
210 220 230 240 250
QGLVKGLRHY GYDDLAILVS QRGHYSLAKT ADLLGIGREN IIQIPTSSDN
260 270 280 290 300
KVDVSKMREM AAKLNDDNIK VMAIVGVAGT TETGNIDPLD ELATLASELN
310 320 330 340 350
CHFHVDAAWG GASLLSNKYR HLLKGIERAD SVTIDAHKQM YVPMGAGMVI
360 370 380 390 400
FKDPAFANAI KHHAEYILRK GSKDLGSQTL EGSRPGMAML VHACLQVIGR
410 420 430 440 450
DGYEILINNS LEKARYFADL IKQHQDFELV SEPELCLLTY RYVPKSVQMA
460 470 480 490 500
MAQARENKDV QSLIEFNRLL DGLTKFVQKR QREQGTSFVS RTRINPEAGI
510 520 530 540 550
VDIKSVVFRV VLANPLTTHE ILAQVLSEQS EIANQDNKFL PQLLQLANLK

N
Length:551
Mass (Da):61,167
Last modified:April 29, 2008 - v1
Checksum:i94F2955B9712082B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000961 Genomic DNA Translation: ACA87406.1

Genome annotation databases

EnsemblBacteriaiACA87406; ACA87406; Swoo_3135
KEGGiswd:Swoo_3135

Similar proteinsi

Entry informationi

Entry nameiB1KMM8_SHEWM
AccessioniPrimary (citable) accession number: B1KMM8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: March 28, 2018
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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