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B1KMI9 (B1KMI9_SHEWM) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Swoo_1702 EMBL ACA85987.1
OrganismShewanella woodyi (strain ATCC 51908 / MS32) [Complete proteome] [HAMAP] EMBL ACA85987.1
Taxonomic identifier392500 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length460 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B1KMI9 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 834B869EB2AC21F3

FASTA46051,859
        10         20         30         40         50         60 
MVDSLFKFQT ENLNILIVED TQSERCFIAQ LLQNMGLHVN SCSSAEQAIL EYERQEVDIV 

        70         80         90        100        110        120 
ISDWRMPGIT GPELCEHLKS LPFPPYIILL TSNNLAEHMI QGIESGADDF ISKPFVPNVL 

       130        140        150        160        170        180 
KVRILAAARI VKLQRKLTHK NSELNTALAN EHECLKQIQS DMKSAVKLQS SHLPSSSHLI 

       190        200        210        220        230        240 
NQWHLATRFN PAQELAGDIF QCIEIDKTHI GFYLLDVTGH GIAASMQSFT LAQQLSCNSC 

       250        260        270        280        290        300 
DWESLDPALI VNKLNQDFED PENKGRFATL ILGIANSLTG EIRITVAGHP QPILLDDTGA 

       310        320        330        340        350        360 
RLMELDSGLP LGIDRQFSYR YSKFTLKSHQ HLMLYSDGLY ESMHPRFGEF GITRLVKRCD 

       370        380        390        400        410        420 
QAHSLSPESL LHHLSHSINL WQQKKPQDDI SMMLLSAPSL FKQSPMLDST PVKELYYSHV 

       430        440        450        460 
ETEDRTFKNE AVINEVLPVH PLSKASITSA SDCISRRIYE 

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References

[1]"Complete sequence of Shewanella woodyi ATCC 51908."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Lykidis A., Zhao J.-S., Richardson P.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51908 / MS32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000961 Genomic DNA. Translation: ACA85987.1.
RefSeqYP_001760082.1. NC_010506.1.

3D structure databases

ProteinModelPortalB1KMI9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING392500.Swoo_1702.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA85987; ACA85987; Swoo_1702.
GeneID6115943.
KEGGswd:Swoo_1702.
PATRIC23605749. VBISheWoo126588_1764.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0745.
HOGENOMHOG000291805.
OMATFRLHAL.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycSWOO392500:GI2C-1726-MONOMER.

Family and domain databases

InterProIPR011006. CheY-like_superfamily.
IPR001932. PP2C-like_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF52172. SSF52172. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1KMI9_SHEWM
AccessionPrimary (citable) accession number: B1KMI9
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)