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B1KIS4 (TAL_SHEWM) Reviewed, UniProtKB/Swiss-Prot

Last modified May 29, 2013. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Transaldolase
EC=2.2.1.2
Gene names
Name:tal
Ordered Locus Names:Swoo_1280
OrganismShewanella woodyi (strain ATCC 51908 / MS32) [Complete proteome] [HAMAP]
Taxonomic identifier392500 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella ›

Protein attributes

Sequence length318 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway By similarity. HAMAP-Rule MF_00492

Catalytic activity

Sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-erythrose 4-phosphate + D-fructose 6-phosphate. HAMAP-Rule MF_00492

Pathway

Carbohydrate degradation; pentose phosphate pathway; D-glyceraldehyde 3-phosphate and beta-D-fructose 6-phosphate from D-ribose 5-phosphate and D-xylulose 5-phosphate (non-oxidative stage): step 2/3. HAMAP-Rule MF_00492

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_00492

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00492.

Sequence similarities

Belongs to the transaldolase family. Type 1 subfamily.

Ontologies

Keywords
   Biological processPentose shunt
   Cellular componentCytoplasm
   Molecular functionTransferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpentose-phosphate shunt

Inferred from electronic annotation. Source: HAMAP

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionsedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 318318Transaldolase HAMAP-Rule MF_00492
PRO_1000126257

Sites

Active site1321 By similarity

Sequences

Sequence LengthMass (Da)Tools
B1KIS4 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 7700BA9E1995115E

FASTA31835,107
        10         20         30         40         50         60 
MANTLEQFKS ITTIVADTGD IEAIKRYQPE DATTNPSLIL KAAQIPDYAH LIENAIEWAK 

        70         80         90        100        110        120 
TQSSQIDQQV EDAGDKLAVN IGVEILKIVP GRISTEVDAR LSFDKAGSIA KAHKLIKLYQ 

       130        140        150        160        170        180 
EAGIDKSRIL IKLASTWEGI CAAKELEQEG INCNLTLLFS FAQARACAEA GVYLISPFVG 

       190        200        210        220        230        240 
RILDWYKKDT GLEYSATEDP GVVSVTEIYN YYKRHGFNTV VMGASFRNTG EIIELAGCDR 

       250        260        270        280        290        300 
LTIGPALLEE MANSQTEVVR KLIPAETTVE AGEPLTEAQF RWEFNENPMA VEKLAEGIRN 

       310 
FAIDQGKLEV MLKEKLTS

« Hide

References

[1]"Complete sequence of Shewanella woodyi ATCC 51908."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Lykidis A., Zhao J.-S., Richardson P.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51908 / MS32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000961 Genomic DNA. Translation: ACA85572.1.
RefSeqYP_001759667.1. NC_010506.1.

3D structure databases

ProteinModelPortalB1KIS4.
SMRB1KIS4. Positions 3-316.
ModBaseSearch...

Protein-protein interaction databases

STRING392500.Swoo_1280.

Proteomic databases

PRIDEB1KIS4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA85572; ACA85572; Swoo_1280.
GeneID6115515.
KEGGswd:Swoo_1280.
PATRIC23604861. VBISheWoo126588_1326.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0176.
HOGENOMHOG000281234.
KOK00616.
OMAEYKPQDA.
ProtClustDBPRK05269.

Enzyme and pathway databases

BioCycSWOO392500:GI2C-1298-MONOMER.
UniPathwayUPA00115; UER00414.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
HAMAPMF_00492. Transaldolase_1.
InterProIPR013785. Aldolase_TIM.
IPR001585. Transaldolase.
IPR004730. Transaldolase_1.
IPR018225. Transaldolase_AS.
[Graphical view]
PANTHERPTHR10683. PTHR10683. 1 hit.
PfamPF00923. Transaldolase. 1 hit.
[Graphical view]
TIGRFAMsTIGR00874. talAB. 1 hit.
PROSITEPS01054. TRANSALDOLASE_1. 1 hit.
PS00958. TRANSALDOLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameTAL_SHEWM
AccessionPrimary (citable) accession number: B1KIS4
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 29, 2008
Last modified: May 29, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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