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Protein
Submitted name:

NUDIX hydrolase

Gene

Swoo_2704

Organism
Shewanella woodyi (strain ATCC 51908 / MS32)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseUniRule annotationSAAS annotationImported

Enzyme and pathway databases

BioCyciSWOO392500:GI2C-2761-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
NUDIX hydrolaseImported
Gene namesi
Ordered Locus Names:Swoo_2704Imported
OrganismiShewanella woodyi (strain ATCC 51908 / MS32)Imported
Taxonomic identifieri392500 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000002168 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi392500.Swoo_2704.

Structurei

3D structure databases

ProteinModelPortaliB1KIC9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 132Nudix hydrolaseInterPro annotationAdd BLAST129

Sequence similaritiesi

Belongs to the Nudix hydrolase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105KB7. Bacteria.
COG0494. LUCA.
HOGENOMiHOG000256353.
KOiK12152.
OMAiRWKPNVT.
OrthoDBiPOG091H0H7V.

Family and domain databases

CDDicd03675. Nudix_Hydrolase_2. 1 hit.
Gene3Di3.90.79.10. 1 hit.
InterProiIPR020476. Nudix_hydrolase.
IPR020084. NUDIX_hydrolase_CS.
IPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
IPR033713. NudJ.
[Graphical view]
PfamiPF00293. NUDIX. 1 hit.
[Graphical view]
PRINTSiPR00502. NUDIXFAMILY.
SUPFAMiSSF55811. SSF55811. 1 hit.
PROSITEiPS51462. NUDIX. 1 hit.
PS00893. NUDIX_BOX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1KIC9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKPRYRPNVT VACIVQCQDK YLMVEELIDG QTRYNQPAGH LEKGESITQA
60 70 80 90 100
CEREVFEETG IKLKVQELVG IYQFNPDDTL AFLRFTFFAQ LSSCVNATPQ
110 120 130 140 150
DTDIQAAHWL TFDEIQALAA KLRSPLVLTS LDDARNKTHY PLELLNSQYL

RLAPSQNA
Length:158
Mass (Da):17,980
Last modified:April 29, 2008 - v1
Checksum:i978A924F37C7909C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000961 Genomic DNA. Translation: ACA86980.1.
RefSeqiWP_012325317.1. NC_010506.1.

Genome annotation databases

EnsemblBacteriaiACA86980; ACA86980; Swoo_2704.
KEGGiswd:Swoo_2704.
PATRICi23607903. VBISheWoo126588_2783.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000961 Genomic DNA. Translation: ACA86980.1.
RefSeqiWP_012325317.1. NC_010506.1.

3D structure databases

ProteinModelPortaliB1KIC9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi392500.Swoo_2704.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACA86980; ACA86980; Swoo_2704.
KEGGiswd:Swoo_2704.
PATRICi23607903. VBISheWoo126588_2783.

Phylogenomic databases

eggNOGiENOG4105KB7. Bacteria.
COG0494. LUCA.
HOGENOMiHOG000256353.
KOiK12152.
OMAiRWKPNVT.
OrthoDBiPOG091H0H7V.

Enzyme and pathway databases

BioCyciSWOO392500:GI2C-2761-MONOMER.

Family and domain databases

CDDicd03675. Nudix_Hydrolase_2. 1 hit.
Gene3Di3.90.79.10. 1 hit.
InterProiIPR020476. Nudix_hydrolase.
IPR020084. NUDIX_hydrolase_CS.
IPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
IPR033713. NudJ.
[Graphical view]
PfamiPF00293. NUDIX. 1 hit.
[Graphical view]
PRINTSiPR00502. NUDIXFAMILY.
SUPFAMiSSF55811. SSF55811. 1 hit.
PROSITEiPS51462. NUDIX. 1 hit.
PS00893. NUDIX_BOX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB1KIC9_SHEWM
AccessioniPrimary (citable) accession number: B1KIC9
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: November 30, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.