B1KH98 (B1KH98_SHEWM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Methylmalonate-semialdehyde dehydrogenase EMBL ACA85406.1

Gene names

Ordered Locus Names:

Swoo_1113

Organism

Shewanella woodyi (strain ATCC 51908 / MS32) [Complete proteome] [HAMAP] EMBL ACA85406.1

Taxonomic identifier

392500 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	496 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	methylmalonate-semialdehyde dehydrogenase (acylating) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1KH98 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 0704F48A716F2120	FASTA	496	53,245
	10 20 30 40 50 60 MQQINHYING AHTDKSERSS PVFEPATGEP KAKVSLASAA EVAGAIELAK KAHSSWSQVS 70 80 90 100 110 120 PLNRSRVLFK FKALVEQNMD ELAELITREH GKVLDDAKGE IIRGLEVVEF ACGIPHLLKG 130 140 150 160 170 180 EHTEQVGGGV DAWCVNQSLG VVAGIAPFNF PVMVPMWMFP IAIAAGNTFI MKPSEKDPSS 190 200 210 220 230 240 VMRMAQLLTE AGLPDGVFNV VNGDKEAVDT LLSHPDIHAV SFVGSTPIAE YIYETASKHG 250 260 270 280 290 300 KRVQALGGAK NHMLLMPDAD INQAVGALMG AAFGSAGERC MAISVVLAVG DSGDALVEKL 310 320 330 340 350 360 LPQIQALRVG NGVTPEMDMG PLISAQHLAK VTSYVDTGVA EGASLLADGR TLSVEDHEQG 370 380 390 400 410 420 YFLGGCLFDN VTPDMTIYKE EIFGPVLAIV RVKDYAEALE LINAHEFGNG TAIFTQSGEA 430 440 450 460 470 480 ARHFCHHVQV GMVGVNVPIP VPMAFHSFGG WKRSLFGPLH MHGPDGVRFY TKRKAITARW 490 PKSSEAKAEF VMPTMK

References

[1]

"Complete sequence of Shewanella woodyi ATCC 51908." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Zhao J.-S., Richardson P. Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51908 / MS32.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000961 Genomic DNA. Translation: ACA85406.1.
RefSeq	YP_001759501.1. NC_010506.1.
3D structure databases
ProteinModelPortal	B1KH98.
ModBase	Search...
Protein-protein interaction databases
STRING	B1KH98.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6115347.
GenomeReviews	Gene locus Swoo_1113 in contig CP000961_GR.
KEGG	swd:Swoo_1113.
PATRIC	23604511. VBISheWoo126588_1152.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG752218.
OMA	LINQHEF.
ProtClustDB	CLSK957803.
Family and domain databases
InterPro	IPR016161. Ald_DH/histidinol_DH. IPR016163. Ald_DH_C. IPR016160. Ald_DH_CS. IPR016162. Ald_DH_N. IPR015590. Aldehyde_DH_dom. IPR010061. MeMal-semiAld_DH. [Graphical view]
Gene3D	G3DSA:3.40.309.10. Aldehyde_dehydrogenase_C. 1 hit. G3DSA:3.40.605.10. Aldehyde_dehydrogenase_N. 1 hit.
KO	K00140.
PANTHER	PTHR11699:SF27. MMSDH. 1 hit.
Pfam	PF00171. Aldedh. 1 hit. [Graphical view]
SUPFAM	SSF53720. Aldehyde_DH/Histidinol_DH. 1 hit.
TIGRFAMs	TIGR01722. MMSDH. 1 hit.
PROSITE	PS00070. ALDEHYDE_DEHYDR_CYS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1KH98_SHEWM

Accession

Primary (citable) accession number: B1KH98

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	January 25, 2012
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)