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B1KFE5 (B1KFE5_SHEWM) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.22 EMBL ACA88120.1
Gene names
Ordered Locus Names:Swoo_3862 EMBL ACA88120.1
OrganismShewanella woodyi (strain ATCC 51908 / MS32) [Complete proteome] [HAMAP] EMBL ACA88120.1
Taxonomic identifier392500 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length427 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
B1KFE5 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: E4C79E95D91BD206

FASTA42745,410
        10         20         30         40         50         60 
MTNSSLQARK VKAIARGQGN AYPVYVERAK NAELWDVEGK RYIDFGTGIA VCNTGHSHPK 

        70         80         90        100        110        120 
IVAAVKAQLD NFSHTCVMVN PYESAVELAE KLTEIAPGES DKKAIFVTTG AEAVENCVKI 

       130        140        150        160        170        180 
ARAHTGRRGV IAFNGGFHGR TNLTMALTGK ITPYKHQFGP FAGDVFHAPF PIDYHNISVK 

       190        200        210        220        230        240 
HSLDALNNLF KVDIAPCDVA AIIVEPVQGE GGFYAAPAEF LQALRSLCDD HGIVLIADEI 

       250        260        270        280        290        300 
QTGFGRTGKM FSFEHAGVEP DLITMAKGIA GGFPIAAVVG KSEIMDAPLP GGLGGTYGGS 

       310        320        330        340        350        360 
PVACVAALTV LDVIKEEGLV ERAAQIGAIF NERLTALQAE YPQLIGEVRN QGAMIAMELV 

       370        380        390        400        410        420 
SNGDCEQANT ALTQAIIAKA AKYGLILLAC GFYGNVIRFL PALTISDELI NEGLDQFVRL 


FGEAANC 

« Hide

References

[1]"Complete sequence of Shewanella woodyi ATCC 51908."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Lykidis A., Zhao J.-S., Richardson P.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51908 / MS32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000961 Genomic DNA. Translation: ACA88120.1.
RefSeqYP_001762215.1. NC_010506.1.

3D structure databases

ProteinModelPortalB1KFE5.
SMRB1KFE5. Positions 2-424.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING392500.Swoo_3862.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA88120; ACA88120; Swoo_3862.
GeneID6118211.
KEGGswd:Swoo_3862.
PATRIC23610389. VBISheWoo126588_3980.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK07250.
OMACGKSAIR.
OrthoDBEOG6QVRHN.
ProtClustDBCLSK938270.

Enzyme and pathway databases

BioCycSWOO392500:GI2C-3995-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1KFE5_SHEWM
AccessionPrimary (citable) accession number: B1KFE5
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: November 13, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)