Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

B1KFE5

- B1KFE5_SHEWM

UniProt

B1KFE5 - B1KFE5_SHEWM

Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Swoo_3862

Organism
Shewanella woodyi (strain ATCC 51908 / MS32)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (29 Apr 2008)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. (S)-3-amino-2-methylpropionate transaminase activity Source: UniProtKB-EC
    2. 4-aminobutyrate transaminase activity Source: InterPro
    3. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. gamma-aminobutyric acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciSWOO392500:GI2C-3995-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    4-aminobutyrate aminotransferaseImported (EC:2.6.1.22Imported)
    Gene namesi
    Ordered Locus Names:Swoo_3862Imported
    OrganismiShewanella woodyi (strain ATCC 51908 / MS32)Imported
    Taxonomic identifieri392500 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000002168: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi392500.Swoo_3862.

    Structurei

    3D structure databases

    ProteinModelPortaliB1KFE5.
    SMRiB1KFE5. Positions 2-424.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0160.
    HOGENOMiHOG000020206.
    KOiK07250.
    OMAiVYVERAK.
    OrthoDBiEOG6QVRHN.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF00202. Aminotran_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
    PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B1KFE5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTNSSLQARK VKAIARGQGN AYPVYVERAK NAELWDVEGK RYIDFGTGIA    50
    VCNTGHSHPK IVAAVKAQLD NFSHTCVMVN PYESAVELAE KLTEIAPGES 100
    DKKAIFVTTG AEAVENCVKI ARAHTGRRGV IAFNGGFHGR TNLTMALTGK 150
    ITPYKHQFGP FAGDVFHAPF PIDYHNISVK HSLDALNNLF KVDIAPCDVA 200
    AIIVEPVQGE GGFYAAPAEF LQALRSLCDD HGIVLIADEI QTGFGRTGKM 250
    FSFEHAGVEP DLITMAKGIA GGFPIAAVVG KSEIMDAPLP GGLGGTYGGS 300
    PVACVAALTV LDVIKEEGLV ERAAQIGAIF NERLTALQAE YPQLIGEVRN 350
    QGAMIAMELV SNGDCEQANT ALTQAIIAKA AKYGLILLAC GFYGNVIRFL 400
    PALTISDELI NEGLDQFVRL FGEAANC 427
    Length:427
    Mass (Da):45,410
    Last modified:April 29, 2008 - v1
    Checksum:iE4C79E95D91BD206
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000961 Genomic DNA. Translation: ACA88120.1.
    RefSeqiWP_012326450.1. NC_010506.1.
    YP_001762215.1. NC_010506.1.

    Genome annotation databases

    EnsemblBacteriaiACA88120; ACA88120; Swoo_3862.
    GeneIDi6118211.
    KEGGiswd:Swoo_3862.
    PATRICi23610389. VBISheWoo126588_3980.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000961 Genomic DNA. Translation: ACA88120.1 .
    RefSeqi WP_012326450.1. NC_010506.1.
    YP_001762215.1. NC_010506.1.

    3D structure databases

    ProteinModelPortali B1KFE5.
    SMRi B1KFE5. Positions 2-424.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 392500.Swoo_3862.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACA88120 ; ACA88120 ; Swoo_3862 .
    GeneIDi 6118211.
    KEGGi swd:Swoo_3862.
    PATRICi 23610389. VBISheWoo126588_3980.

    Phylogenomic databases

    eggNOGi COG0160.
    HOGENOMi HOG000020206.
    KOi K07250.
    OMAi VYVERAK.
    OrthoDBi EOG6QVRHN.

    Enzyme and pathway databases

    BioCyci SWOO392500:GI2C-3995-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
    PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 51908 / MS32Imported.

    Entry informationi

    Entry nameiB1KFE5_SHEWM
    AccessioniPrimary (citable) accession number: B1KFE5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 29, 2008
    Last sequence update: April 29, 2008
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3