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B1KFE5

- B1KFE5_SHEWM

UniProt

B1KFE5 - B1KFE5_SHEWM

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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Swoo_3862

Organism
Shewanella woodyi (strain ATCC 51908 / MS32)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. (S)-3-amino-2-methylpropionate transaminase activity Source: UniProtKB-EC
  2. 4-aminobutyrate transaminase activity Source: InterPro
  3. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSWOO392500:GI2C-3995-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported (EC:2.6.1.22Imported)
Gene namesi
Ordered Locus Names:Swoo_3862Imported
OrganismiShewanella woodyi (strain ATCC 51908 / MS32)Imported
Taxonomic identifieri392500 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000002168: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi392500.Swoo_3862.

Structurei

3D structure databases

ProteinModelPortaliB1KFE5.
SMRiB1KFE5. Positions 2-424.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiVYVERAK.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1KFE5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTNSSLQARK VKAIARGQGN AYPVYVERAK NAELWDVEGK RYIDFGTGIA
60 70 80 90 100
VCNTGHSHPK IVAAVKAQLD NFSHTCVMVN PYESAVELAE KLTEIAPGES
110 120 130 140 150
DKKAIFVTTG AEAVENCVKI ARAHTGRRGV IAFNGGFHGR TNLTMALTGK
160 170 180 190 200
ITPYKHQFGP FAGDVFHAPF PIDYHNISVK HSLDALNNLF KVDIAPCDVA
210 220 230 240 250
AIIVEPVQGE GGFYAAPAEF LQALRSLCDD HGIVLIADEI QTGFGRTGKM
260 270 280 290 300
FSFEHAGVEP DLITMAKGIA GGFPIAAVVG KSEIMDAPLP GGLGGTYGGS
310 320 330 340 350
PVACVAALTV LDVIKEEGLV ERAAQIGAIF NERLTALQAE YPQLIGEVRN
360 370 380 390 400
QGAMIAMELV SNGDCEQANT ALTQAIIAKA AKYGLILLAC GFYGNVIRFL
410 420
PALTISDELI NEGLDQFVRL FGEAANC
Length:427
Mass (Da):45,410
Last modified:April 29, 2008 - v1
Checksum:iE4C79E95D91BD206
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000961 Genomic DNA. Translation: ACA88120.1.
RefSeqiYP_001762215.1. NC_010506.1.

Genome annotation databases

EnsemblBacteriaiACA88120; ACA88120; Swoo_3862.
GeneIDi6118211.
KEGGiswd:Swoo_3862.
PATRICi23610389. VBISheWoo126588_3980.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000961 Genomic DNA. Translation: ACA88120.1 .
RefSeqi YP_001762215.1. NC_010506.1.

3D structure databases

ProteinModelPortali B1KFE5.
SMRi B1KFE5. Positions 2-424.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 392500.Swoo_3862.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACA88120 ; ACA88120 ; Swoo_3862 .
GeneIDi 6118211.
KEGGi swd:Swoo_3862.
PATRICi 23610389. VBISheWoo126588_3980.

Phylogenomic databases

eggNOGi COG0160.
HOGENOMi HOG000020206.
KOi K07250.
OMAi VYVERAK.
OrthoDBi EOG6QVRHN.

Enzyme and pathway databases

BioCyci SWOO392500:GI2C-3995-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
PANTHERi PTHR11986. PTHR11986. 1 hit.
Pfami PF00202. Aminotran_3. 1 hit.
[Graphical view ]
PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51908 / MS32Imported.

Entry informationi

Entry nameiB1KFE5_SHEWM
AccessioniPrimary (citable) accession number: B1KFE5
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: October 29, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3