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B1KDT6 (B1KDT6_SHEWM) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glucan 1,4-alpha-glucosidase EMBL ACA86483.1
EC=3.2.1.3 EMBL ACA86483.1
Gene names
Ordered Locus Names:Swoo_2201
OrganismShewanella woodyi (strain ATCC 51908 / MS32) [Complete proteome] [HAMAP] EMBL ACA86483.1
Taxonomic identifier392500 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length840 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3434 Potential EMBL ACA86483.1
Chain35 – 840806 Potential EMBL ACA86483.1
PRO_5000316346

Sequences

Sequence LengthMass (Da)Tools
B1KDT6 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 53E022C4A0F3F1C3

FASTA84092,408
        10         20         30         40         50         60 
MIFRPSNLPV QFSKTILTIA VTGFLSACSP SSTQTEPAKP IASNIATGAP GNEPTWAFAG 

        70         80         90        100        110        120 
KTGIGTSYQA YDKEELEKSP NSRVWFSIAQ GVLTETMYGL IHNAQLKEMQ FIITGEGFVD 

       130        140        150        160        170        180 
TEKDNTTSTI DYLHKDKMGR PLSLAYKVVN RDIEGKYEIE KHIFTDPKRD SLMMRVIFTA 

       190        200        210        220        230        240 
FEDGITPYVY LNPHIDNSGA NDIAKVINEP NKQQLQAYTG ASQSSVLTLR SDLVFTKASA 

       250        260        270        280        290        300 
GFVGRSDGLT DLKQDGKMDW QFTSTSEEKN HNKQPSQNLG NVALTAQLPT PQRSTDEKDS 

       310        320        330        340        350        360 
SLDFNLVLGF GQSKTESLAN ADATLADGNN TVLDTYNGKG DALGWQDYLA SLTQLSPMSA 

       370        380        390        400        410        420 
NTTDNGKLLY ASALVLKAQE DKTHPGALIA SLSNPWGDTI PATKASTGYK AVWPRDFYQC 

       430        440        450        460        470        480 
AMAFLAMGDT QTAKVAFEYL KKVQATKDTP GFSGTPGWFL QKTQVDGEIE WVAVQLDQTA 

       490        500        510        520        530        540 
MPIMLAWKLW QAGVLTDSDI AHWYAQMLKP AAEFLVTGGE VNLGWNHSEI TPLKTQQERW 

       550        560        570        580        590        600 
EEQIGYSPST SAAVISGLIA ASEIAKVADD NQGAERYLIT AKTMNNKLSK LLITDNGLLS 

       610        620        630        640        650        660 
ATSPVPLTGK QAPAPYYLRL APNGTPNTDD RLGDNNGRPG LDQRLVLDGG FLELVRYGVR 

       670        680        690        700        710        720 
PAQDPVIEQT LALIDNTQLE DQLRVKYLFT AKDGTQFPGF RRYGNDGYGE DTQTGDNYAE 

       730        740        750        760        770        780 
KGSNSLGQRG RVWPFFTGER GHYELAKAIQ SDQLTKEKQS ELINTYVQGM EAFANDGLML 

       790        800        810        820        830        840 
PEQAWDGVGH ATRYQYQLGQ GTNSATPLAW THAEYIKLVR SMTDKQVWDH YELVSKTLNE

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References

[1]"Complete sequence of Shewanella woodyi ATCC 51908."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Lykidis A., Zhao J.-S., Richardson P.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51908 / MS32.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000961 Genomic DNA. Translation: ACA86483.1.
RefSeqYP_001760578.1. NC_010506.1.

3D structure databases

ProteinModelPortalB1KDT6.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1KDT6.

Protein family/group databases

CAZyGH15. Glycoside Hydrolase Family 15.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6116471.
GenomeReviewsGene locus Swoo_2201 in contig CP000961_GR.
KEGGswd:Swoo_2201.
PATRIC23606825. VBISheWoo126588_2273.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG290978.
OMARWEENAG.
ProtClustDBCLSK890895.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR015220. Glucodextran_N.
IPR011013. Glyco_hydro-type_carb-bd.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR011613. Glyco_hydro_15.
[Graphical view]
Gene3DG3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
G3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit.
KOK01178.
PfamPF09137. Glucodextran_N. 1 hit.
PF00723. Glyco_hydro_15. 1 hit.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 1 hit.
SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1KDT6_SHEWM
AccessionPrimary (citable) accession number: B1KDT6
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: January 25, 2012
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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