Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Ribosomal RNA large subunit methyltransferase G

Gene

rlmG

Organism
Shewanella woodyi (strain ATCC 51908 / MS32)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + guanine(1835) in 23S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanine(1835) in 23S rRNA.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Biological processi

rRNA processing

Keywords - Ligandi

S-adenosyl-L-methionine

Enzyme and pathway databases

BioCyciSWOO392500:GI2C-3742-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA large subunit methyltransferase GUniRule annotation (EC:2.1.1.174UniRule annotation)
Alternative name(s):
23S rRNA m2G1835 methyltransferaseUniRule annotation
rRNA (guanine-N(2)-)-methyltransferase RlmGUniRule annotation
Gene namesi
Name:rlmGUniRule annotation
Ordered Locus Names:Swoo_3625
OrganismiShewanella woodyi (strain ATCC 51908 / MS32)
Taxonomic identifieri392500 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000002168 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 419419Ribosomal RNA large subunit methyltransferase GPRO_0000366520Add
BLAST

Proteomic databases

PRIDEiB1KD54.

Interactioni

Protein-protein interaction databases

STRINGi392500.Swoo_3625.

Structurei

3D structure databases

ProteinModelPortaliB1KD54.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the methyltransferase superfamily. RlmG family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105D8J. Bacteria.
COG2813. LUCA.
HOGENOMiHOG000246323.
KOiK00564.
OMAiFHQQQVV.
OrthoDBiPOG091H05RK.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01859. 23SrRNA_methyltr_G. 1 hit.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR017237. rRNA_m2G-MeTrfase_RsmD.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
[Graphical view]
PIRSFiPIRSF037565. RRNA_m2G_Mtase_RsmD_prd. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.

Sequencei

Sequence statusi: Complete.

B1KD54-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTQFSVAGI ELELARYPKD QESNLQAWDA ADEHLIKHLI ETEQTPVVTA
60 70 80 90 100
IINDNFGALT ACLRSIAPTW PLMVETDAKT SLLGNLQNLA TNNLSSEGIE
110 120 130 140 150
WLNSREALPE QIELVLMKLP KNLTYFAHQL NRLSQVLPKG TQVLISAKAK
160 170 180 190 200
SINKSVLELI GKNLGSASAS LTWKKTRVIT CISDGEIRSL PKEMQWSVPR
210 220 230 240 250
LNLEIRNLSN VFAANKLDIG AEIMLENMPK GDFKSIIDLG CGNGILGLHA
260 270 280 290 300
KQLFPQAYIH FVDDSEMAIE SAKQNWALNK LDTQGLVGEQ ATFGWDDCLT
310 320 330 340 350
HMSEGVRPDL VLCNPPFHQG EAITDHIAWQ MFLQSWRALK NGGILHVVGN
360 370 380 390 400
RHLAYHIKLQ RIFKNCTTVA SNGKFVILQA QKISKKAEPF ETHPTEAEAK
410
VEVTESKPHP QSSLYGTKK
Length:419
Mass (Da):46,575
Last modified:April 29, 2008 - v1
Checksum:i4FAC427C318A57A7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000961 Genomic DNA. Translation: ACA87889.1.
RefSeqiWP_012326222.1. NC_010506.1.

Genome annotation databases

EnsemblBacteriaiACA87889; ACA87889; Swoo_3625.
KEGGiswd:Swoo_3625.
PATRICi23609869. VBISheWoo126588_3734.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000961 Genomic DNA. Translation: ACA87889.1.
RefSeqiWP_012326222.1. NC_010506.1.

3D structure databases

ProteinModelPortaliB1KD54.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi392500.Swoo_3625.

Proteomic databases

PRIDEiB1KD54.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACA87889; ACA87889; Swoo_3625.
KEGGiswd:Swoo_3625.
PATRICi23609869. VBISheWoo126588_3734.

Phylogenomic databases

eggNOGiENOG4105D8J. Bacteria.
COG2813. LUCA.
HOGENOMiHOG000246323.
KOiK00564.
OMAiFHQQQVV.
OrthoDBiPOG091H05RK.

Enzyme and pathway databases

BioCyciSWOO392500:GI2C-3742-MONOMER.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01859. 23SrRNA_methyltr_G. 1 hit.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR017237. rRNA_m2G-MeTrfase_RsmD.
IPR029063. SAM-dependent_MTases.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
[Graphical view]
PIRSFiPIRSF037565. RRNA_m2G_Mtase_RsmD_prd. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRLMG_SHEWM
AccessioniPrimary (citable) accession number: B1KD54
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: April 29, 2008
Last modified: September 7, 2016
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.