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B1K568 (SELD_BURCC) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Selenide, water dikinase
EC=2.7.9.3
Alternative name(s):
Selenium donor protein
Selenophosphate synthase
Gene names
Name:selD
Ordered Locus Names:Bcenmc03_4912
OrganismBurkholderia cenocepacia (strain MC0-3) [Complete proteome] [HAMAP]
Taxonomic identifier406425 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length354 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes selenophosphate from selenide and ATP By similarity. HAMAP MF_00625

Catalytic activity

ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625

Cofactor

Magnesium By similarity. HAMAP MF_00625

Sequence similarities

Belongs to the selenophosphate synthase 1 family. Class I subfamily.

Ontologies

Keywords
   LigandATP-binding
Magnesium
Nucleotide-binding
Selenium
   Molecular functionKinase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

selenide, water dikinase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 354354Selenide, water dikinase HAMAP MF_00625
PRO_1000130516

Regions

Nucleotide binding236 – 2427ATP Potential

Sites

Active site231 Potential
Site261Important for catalytic activity By similarity

Sequences

Sequence LengthMass (Da)Tools
B1K568 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 17ACDC570EC869A3

FASTA35436,198
        10         20         30         40         50         60 
MTEATQAQPA VPRLTSLSHG GGCGCKIAPG VLSELLKRAT PPALFPDLLV GTETSDDAAV 

        70         80         90        100        110        120 
YRLNDEQAIV ATTDFFMPIV DDPFDFGRIA ATNALSDVYA MGGKPILALA LVGMPINVLP 

       130        140        150        160        170        180 
HETIAAVLRG GESVCADAGI PVAGGHSIDS VEPIYGLAAI GVVHPSRVKR NAAARAGDVL 

       190        200        210        220        230        240 
VLGKPLGVGV LSAALKKNQL DADGYAQMVA TTTKLNRPGA ELAALPGVHA LTDVTGFGLL 

       250        260        270        280        290        300 
GHTLELARGA QLTARVHYAS LPWLAGVETF VADGVFTGAS GRNWAAYGTD VRLADGLPPV 

       310        320        330        340        350 
AQALLTDPQT SGGLLVACAP EAVDDVLACF RADGFDRAAV IGEMVDGPAR VDVA

« Hide

References

[1]"Complete sequence of chromosome 2 of Burkholderia cenocepacia MC0-3."
Copeland A., Lucas S., Lapidus A., Barry K., Bruce D., Goodwin L., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Tiedje J., Richardson P.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MC0-3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000959 Genomic DNA. Translation: ACA94042.1.
RefSeqYP_001778532.1. NC_010515.1.

3D structure databases

ProteinModelPortalB1K568.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1K568.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6127724.
GenomeReviewsGene locus Bcenmc03_4912 in contig CP000959_GR.
KEGGbcm:Bcenmc03_4912.
PATRIC19099480. VBIBurCen61509_6206.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG383791.
OMADYIAQGC.
ProtClustDBPRK00943.

Family and domain databases

HAMAPMF_00625. SelD.
[Tree]
InterProIPR000728. AIR_synth.
IPR010918. AIR_synth_C.
IPR016188. PurM_N-like.
IPR004536. SelD.
IPR023061. SelD_I.
[Graphical view]
KOK01008.
PfamPF00586. AIRS. 1 hit.
PF02769. AIRS_C. 1 hit.
[Graphical view]
PIRSFPIRSF036407. Selenphspht_syn. 1 hit.
SUPFAMSSF56042. AIR_synth_C. 1 hit.
SSF55326. PurM_N-like. 1 hit.
TIGRFAMsTIGR00476. SelD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameSELD_BURCC
AccessionPrimary (citable) accession number: B1K568
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 29, 2008
Last modified: January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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