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B1JVZ7 (B1JVZ7_BURCC) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alanine racemase domain protein EMBL ACA89877.1
Gene names
Ordered Locus Names:Bcenmc03_0699
OrganismBurkholderia cenocepacia (strain MC0-3) [Complete proteome] [HAMAP] EMBL ACA89877.1
Taxonomic identifier406425 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length232 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. PIRSR PIRSR004848-1

Sequence similarities

Belongs to the UPF0001 family. RuleBase RU004514

Ontologies

Keywords
   LigandPyridoxal phosphate PIRSR PIRSR004848-1
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Amino acid modifications

Modified residue361N6-(pyridoxal phosphate)lysine By similarity PIRSR PIRSR004848-1

Sequences

Sequence LengthMass (Da)Tools
B1JVZ7 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 05A810B2FC7CC39A

FASTA23224,771
        10         20         30         40         50         60 
MSDLAARLAS VHRRIADAAR AAGRDPATVS LLAVSKTFPA DDVRAAHAAG QHAFGENYVQ 

        70         80         90        100        110        120 
ESIDKIDALA DLRASLEWHF IGPLQSNKTR PVAERFDWVH SVDRLKIAQR LSEQRPAHLP 

       130        140        150        160        170        180 
PLNVCVQVNI SGEASKSGVA PADVAEVARA VAALPSLRLR GLMAIPEPAD DTDAQRAPHR 

       190        200        210        220        230 
ALRALFDTLR ADGLPLDTLS MGMSADLDAA VLEGATIVRV GTAIFGARDY AH

« Hide

References

[1]"Complete sequence of chromosome 1 of Burkholderia cenocepacia MC0-3."
Copeland A., Lucas S., Lapidus A., Barry K., Bruce D., Goodwin L., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Tiedje J., Richardson P.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000958 Genomic DNA. Translation: ACA89877.1.
RefSeqYP_001763999.1. NC_010508.1.

3D structure databases

ProteinModelPortalB1JVZ7.
SMRB1JVZ7. Positions 3-227.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1JVZ7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6122380.
GenomeReviewsGene locus Bcenmc03_0699 in contig CP000958_GR.
KEGGbcm:Bcenmc03_0699.
PATRIC19088370. VBIBurCen61509_0721.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG289671.
OMAAENREQE.
ProtClustDBCLSK942070.

Family and domain databases

InterProIPR001608. Ala_racemase_N.
IPR011078. UPF0001.
[Graphical view]
KOK06997.
PANTHERPTHR10146. PP_YBL036C. 1 hit.
PfamPF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PIRSFPIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMsTIGR00044. TIGR00044. 1 hit.
PROSITEPS01211. UPF0001. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1JVZ7_BURCC
AccessionPrimary (citable) accession number: B1JVZ7
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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