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B1JUG9 (B1JUG9_BURCC) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase 1 HAMAP MF_01201
EC=5.1.1.1 HAMAP MF_01201
Gene names
Name:alr1 HAMAP MF_01201
Ordered Locus Names:Bcenmc03_2058
OrganismBurkholderia cenocepacia (strain MC0-3) [Complete proteome] [HAMAP] EMBL ACA91219.1
Taxonomic identifier406425 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length356 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the D-alanine required for cell wall biosynthesis By similarity. HAMAP MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP MF_01201 SAAS SAAS009006

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site351Proton acceptor; specific for D-alanine By similarity HAMAP MF_01201
Active site2531Proton acceptor; specific for L-alanine By similarity HAMAP MF_01201

Amino acid modifications

Modified residue351N6-(pyridoxal phosphate)lysine By similarity HAMAP MF_01201

Sequences

Sequence LengthMass (Da)Tools
B1JUG9 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: C1E128634DA940E8

FASTA35638,143
        10         20         30         40         50         60 
MPRPISATIH TAALANNLSV VRRFAGPSKV WAVVKANAYG HGLARAFPGL RGTDGFGLLD 

        70         80         90        100        110        120 
LDEAVKLREL GWAGPILLLE GFFRSTDIDV IDRYSLTTTV HNDEQMRMLE TARLSKPVNV 

       130        140        150        160        170        180 
QLKMNSGMNR LGYVPEKYRA AWERARACPG IGQITLMTHF SDADNERGVA EQLATFERGA 

       190        200        210        220        230        240 
ESIAGARSLA NSAAVLWHPD THFDWVRPGI VLYGASPSGL SSDIADTGLK PAMTLASELI 

       250        260        270        280        290        300 
AVQTIGKGQA IGYGSTFSAQ APMRIGVVAC GYADGYPRVA PEGTPVIVDG IRTRIVGRVS 

       310        320        330        340        350 
MDMITVDLTP CPQAGVSARV ELWGNALPID DVARHCGTIG YELMCAVAAR VPVRAE

« Hide

References

[1]"Complete sequence of chromosome 1 of Burkholderia cenocepacia MC0-3."
Copeland A., Lucas S., Lapidus A., Barry K., Bruce D., Goodwin L., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Tiedje J., Richardson P.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000958 Genomic DNA. Translation: ACA91219.1.
RefSeqYP_001765341.1. NC_010508.1.

3D structure databases

ProteinModelPortalB1JUG9.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1JUG9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6123722.
GenomeReviewsGene locus Bcenmc03_2058 in contig CP000958_GR.
KEGGbcm:Bcenmc03_2058.
PATRIC19091249. VBIBurCen61509_2129.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG712172.
OMANWQIKAL.
ProtClustDBPRK00053.

Family and domain databases

HAMAPMF_01201. Ala_racemase.
[Tree]
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
Gene3DG3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 1 hit.
KOK01775.
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. Alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1JUG9_BURCC
AccessionPrimary (citable) accession number: B1JUG9
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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