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Protein

GDP-mannose pyrophosphatase NudK

Gene

nudK

Organism
Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalyzes the hydrolysis of GDP-mannose.By similarity

Catalytic activityi

GDP-mannose + H2O = GMP + mannose-1-phosphate.

Cofactori

Mg2+By similarity

GO - Molecular functioni

Keywordsi

Molecular functionHydrolase
LigandMagnesium

Names & Taxonomyi

Protein namesi
Recommended name:
GDP-mannose pyrophosphatase NudK (EC:3.6.1.-)
Gene namesi
Name:nudK
Ordered Locus Names:YPK_1390
OrganismiYersinia pseudotuberculosis serotype O:3 (strain YPIII)
Taxonomic identifieri502800 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesYersiniaceaeYersinia
Proteomesi
  • UP000000721 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003425111 – 198GDP-mannose pyrophosphatase NudKAdd BLAST198

Interactioni

Subunit structurei

Homodimer.By similarity

Structurei

3D structure databases

ProteinModelPortaliB1JSJ3
SMRiB1JSJ3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini43 – 180Nudix hydrolasePROSITE-ProRule annotationAdd BLAST138

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi86 – 106Nudix boxAdd BLAST21

Sequence similaritiesi

Belongs to the Nudix hydrolase family. NudK subfamily.Curated

Phylogenomic databases

HOGENOMiHOG000045855
OMAiRTPAACI

Family and domain databases

InterProiView protein in InterPro
IPR004385 NDP_pyrophosphatase
IPR015797 NUDIX_hydrolase-like_dom_sf
IPR000086 NUDIX_hydrolase_dom
PfamiView protein in Pfam
PF00293 NUDIX, 1 hit
SUPFAMiSSF55811 SSF55811, 1 hit
TIGRFAMsiTIGR00052 TIGR00052, 1 hit
PROSITEiView protein in PROSITE
PS51462 NUDIX, 1 hit

Sequencei

Sequence statusi: Complete.

B1JSJ3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVKIENIQC ELLSKNWFKL HKYTFDLKTD EGTSVQQIRE VYDRGNGATI
60 70 80 90 100
LLYNRQQGTV VLIEQFRMPT YVNGNASGML LEACAGLLDN DSPEACIRRE
110 120 130 140 150
AMEETGYQVD KVQKLFEAYM SPGGVTELVY FFAAEYHPDQ KITDEVGVED
160 170 180 190
EVIEVVELPF HDALAMVADG RIKDGKTIML LQYAQIHFFP SSLTPQRC
Length:198
Mass (Da):22,472
Last modified:April 29, 2008 - v1
Checksum:i8CEB6975DAE1A14B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000950 Genomic DNA Translation: ACA67684.1
RefSeqiWP_002208529.1, NZ_CP009792.1

Genome annotation databases

EnsemblBacteriaiACA67684; ACA67684; YPK_1390
KEGGiypy:YPK_1390
PATRICifig|502800.11.peg.2027

Similar proteinsi

Entry informationi

Entry nameiNUDK_YERPY
AccessioniPrimary (citable) accession number: B1JSJ3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 1, 2008
Last sequence update: April 29, 2008
Last modified: March 28, 2018
This is version 61 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

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