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B1JLN9 (B1JLN9_YERPY) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.1.1.11 EMBL ACA69906.1
Gene names
Ordered Locus Names:YPK_3639
OrganismYersinia pseudotuberculosis serotype O:3 (strain YPIII) [Complete proteome] [HAMAP] EMBL ACA69906.1
Taxonomic identifier502800 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length361 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ACA69906.1
   Molecular functionHydrolase EMBL ACA69906.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcell wall modification

Inferred from electronic annotation. Source: InterPro

   Cellular componentcell wall

Inferred from electronic annotation. Source: InterPro

   Molecular functionpectinesterase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2626 Potential EMBL ACA69906.1
Chain27 – 361335 Potential EMBL ACA69906.1
PRO_5000315904

Sequences

Sequence LengthMass (Da)Tools
B1JLN9 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 93D07488E449A564

FASTA36139,451
        10         20         30         40         50         60 
MPINALSKTL LLGLISFAAL GEVSAAQYNA VVSAMAQGDE FSSINAALQS APPDSSPFVI 

        70         80         90        100        110        120 
FLKKGVYTER LEVNRDNVTL KGEERDTTVI GANTAAGMLN PQGTKWGTSG SSTVLVNAAN 

       130        140        150        160        170        180 
FTAENLTIRN DFDFPANQAK AEGDPTKLKD TQAVALLLAE KSDKARFRQV KLEGYQDTLY 

       190        200        210        220        230        240 
SKTGSRSYFT DCDISGHVDF IFGSGVTVFD RCNIIARDRR DISPPYGYIT APSTQNTAPY 

       250        260        270        280        290        300 
GLIVLNSRLT KEPGVPAKSF ALGRPWHPTT AFDDGRYADP AAIGQAVFIN TVMDDHIYGW 

       310        320        330        340        350        360 
DKMSGKDKQG EKVWFYPQDS RFFEANNQGP GAEINEGRRQ LSAEQLKAFT LPMIFPDWTV 


Q 

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References

[1]"Complete sequence of Yersinia pseudotuberculosis YPIII."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Challacombe J.F., Green L., Lindler L.E., Nikolich M.P., Richardson P.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: YPIII.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000950 Genomic DNA. Translation: ACA69906.1.
RefSeqYP_001722359.1. NC_010465.1.

3D structure databases

ProteinModelPortalB1JLN9.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1JLN9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6088353.
GenomeReviewsGene locus YPK_3639 in contig CP000950_GR.
KEGGypy:YPK_3639.
PATRIC18664977. VBIYerPse127545_3939.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG747179.
OMAVFLNTSM.
ProtClustDBCLSK888480.

Family and domain databases

InterProIPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
IPR000070. Pectinesterase_cat.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
KOK01051.
PfamPF01095. Pectinesterase. 1 hit.
[Graphical view]
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1JLN9_YERPY
AccessionPrimary (citable) accession number: B1JLN9
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: January 25, 2012
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)