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B1JA51 (B1JA51_PSEPW) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alginate lyase 2 EMBL ACA73697.1
Gene names
Ordered Locus Names:PputW619_3207
OrganismPseudomonas putida (strain W619) [Complete proteome] [HAMAP] EMBL ACA73697.1
Taxonomic identifier390235 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas ›

Protein attributes

Sequence length224 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ACA73697.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionlyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1JA51 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: E2ECDF8E4F721C3B

FASTA22423,856
        10         20         30         40         50         60 
MAVNIDNLII TTPVPKSASN PVALEVTGAQ ALASLTNVVA RQSDGSIRMT APTKGASSKS 

        70         80         90        100        110        120 
THRTRCEWKE PVYWSLGSAA RHRNHQTMTL EKVNLAQKVV IAQLHVKDNN SPPIKVFWNK 

       130        140        150        160        170        180 
GKITVGFRSD FNQATPANST VLAEVPLGAR FDVSIVVSED GACTVSASSN GRSGTTTALQ 

       190        200        210        220 
LAPSWATQTL NFHGGVYNQV DYSNDTPPGD ASVCVISALE LSHE

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References

[1]"Complete sequence of Pseudomonas putida W619."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Taghavi S., Vangronsveld D., van der Lelie D., Richardson P.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: W619.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000949 Genomic DNA. Translation: ACA73697.1.
RefSeqYP_001750066.1. NC_010501.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyPL7. Polysaccharide Lyase Family 7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA73697; ACA73697; PputW619_3207.
GeneID6112158.
KEGGppw:PputW619_3207.
PATRIC19956278. VBIPsePut93764_3235.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG311268.
HOGENOMHOG000289541.
OMAKSTHRTR.
ProtClustDBCLSK909453.

Enzyme and pathway databases

BioCycPPUT390235:GHHJ-3251-MONOMER.

Family and domain databases

Gene3D2.60.120.200. 1 hit.
InterProIPR014895. Alginate_lyase_2.
IPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
[Graphical view]
PfamPF08787. Alginate_lyase2. 1 hit.
[Graphical view]
SUPFAMSSF49899. ConA_like_lec_gl. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1JA51_PSEPW
AccessionPrimary (citable) accession number: B1JA51
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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