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B1J4K4 (B1J4K4_PSEPW) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Cytochrome c oxidase subunit 2 RuleBase RU004024
EC=1.9.3.1 RuleBase RU004024
Gene names
Ordered Locus Names:PputW619_0122
OrganismPseudomonas putida (strain W619) [Complete proteome] [HAMAP] EMBL ACA70628.1
Taxonomic identifier390235 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas ›

Protein attributes

Sequence length375 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) By similarity. RuleBase RU004024

Catalytic activity

4 ferrocytochrome c + O2 + 4 H+ = 4 ferricytochrome c + 2 H2O. RuleBase RU004024

Cofactor

Copper A By similarity. RuleBase RU004024

Subcellular location

Membrane; Multi-pass membrane protein By similarity.

Sequence similarities

Belongs to the cytochrome c oxidase subunit 2 family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential EMBL ACA70628.1
Chain24 – 375352 Potential EMBL ACA70628.1
PRO_5000314758

Sequences

Sequence LengthMass (Da)Tools
B1J4K4 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: F563D4657E09AD2F

FASTA37541,815
        10         20         30         40         50         60 
MMRHPPVWMG LLLWLVLGQA NAAWTVNMAP GATEVSNAVF DLHMTIFWIC VIIGVVVFGA 

        70         80         90        100        110        120 
MFWSMVIHRR STGQQAAHFH EHTWVEILWT VVPLLILVAM AIPATKTLID IYDASESDID 

       130        140        150        160        170        180 
IQVTGYQWKW HYKYLGQDVE FFSNLATPAD QIQNKAPKDE HYLLEVDQPL VLPVGAKVRF 

       190        200        210        220        230        240 
LVTAADVIHS WWVPAFAVKR DAIPGFVNEA WTRVEKPGIY RGQCTELCGK DHGFMPVVVE 

       250        260        270        280        290        300 
VKSKADYDTW LGERKAEAAK LKELTSKEWT LEELVARGDK VYHTTCVACH QAEGQGLPPM 

       310        320        330        340        350        360 
FPALKGSKIA TGPKDAHLNI VFHGKPGTSM AAFGKQLSEV DIAAVVTYER NAWGNDKGDM 

       370 
VTPKDVLALK QAQAQ

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References

[1]"Complete sequence of Pseudomonas putida W619."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Taghavi S., Vangronsveld D., van der Lelie D., Richardson P.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: W619.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000949 Genomic DNA. Translation: ACA70628.1.
RefSeqYP_001746997.1. NC_010501.1.

3D structure databases

ProteinModelPortalB1J4K4.
ModBaseSearch...

Protein-protein interaction databases

STRING390235.PputW619_0122.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA70628; ACA70628; PputW619_0122.
GeneID6109292.
KEGGppw:PputW619_0122.
PATRIC19949965. VBIPsePut93764_0125.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2010.
HOGENOMHOG000264987.
KOK02275.
OMAWGNNTGD.
ProtClustDBCLSK865600.

Enzyme and pathway databases

BioCycPPUT390235:GHHJ-122-MONOMER.

Family and domain databases

Gene3D1.10.287.90. 1 hit.
2.60.40.420. 1 hit.
InterProIPR001505. Copper_CuA.
IPR008972. Cupredoxin.
IPR009056. Cyt_c_dom.
IPR014222. Cyt_c_oxidase_su2.
IPR002429. Cyt_c_oxidase_su2_C.
IPR011759. Cyt_c_oxidase_su2_TM_dom.
[Graphical view]
PfamPF00116. COX2. 1 hit.
PF02790. COX2_TM. 1 hit.
[Graphical view]
SUPFAMSSF49503. Cupredoxin. 1 hit.
SSF81464. Cyt_c_oxidase_II-like_TM. 1 hit.
SSF46626. Cytochrome_c. 1 hit.
TIGRFAMsTIGR02866. CoxB. 1 hit.
PROSITEPS00078. COX2. 1 hit.
PS50857. COX2_CUA. 1 hit.
PS50999. COX2_TM. 1 hit.
PS51007. CYTC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1J4K4_PSEPW
AccessionPrimary (citable) accession number: B1J4K4
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: May 1, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info