B1IYX9 (B1IYX9_ECOLC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase family 25 EMBL ACA77205.1

Gene names

Ordered Locus Names:

EcolC_1545

Organism

Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) [Complete proteome] [HAMAP] EMBL ACA77205.1

Taxonomic identifier

481805 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	272 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ACA77205.1
Molecular function	Hydrolase EMBL ACA77205.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro lysozyme activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 25	25	Potential EMBL ACA77205.1
	Chain	26 – 272	247	Potential EMBL ACA77205.1		PRO_5000314311

Sequences

	Sequence		Length	Mass (Da)
	B1IYX9 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 35435731C5F6C337	FASTA	272	31,604
	10 20 30 40 50 60 MQLRITSRKK LTSLLCALGL ISIVAIYPRQ TVNFFYSTAV QITDYIHFYG YRPVKSFAIR 70 80 90 100 110 120 IPASYTIHGI DVSRWQERID WQRVAKMRDN GIRLQFAFIK ATEGEKLVDP YFSRNWQLSR 130 140 150 160 170 180 ENGLLRGAYH YFSPSVSASV QARLFLQTVD FSQGDFPAVL DVEERGKLSA KELRKRVSQW 190 200 210 220 230 240 LKMVEKSTGK KPIIYSGAVF YHTNLAGYFN EYPWWVAHYY QRRPDNDGMA WRFWQHSDRG 250 260 270 QVDGINGPVD FNVFNGTVEE LQAFVDGIKE TP

References

[1]

"Complete sequence of Escherichia coli C str. ATCC 8739." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Mikhailova N., Ingram L., Richardson P. Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000946 Genomic DNA. Translation: ACA77205.1.
RefSeq	YP_001724532.1. NC_010468.1.
3D structure databases
ProteinModelPortal	B1IYX9.
SMR	B1IYX9. Positions 60-264.
ModBase	Search...
Protein-protein interaction databases
STRING	B1IYX9.
Protein family/group databases
CAZy	GH25. Glycoside Hydrolase Family 25.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000007902; EBESCP00000007586; EBESCG00000006965.
GeneID	6065408.
GenomeReviews	Gene locus EcolC_1545 in contig CP000946_GR.
KEGG	ecl:EcolC_1545.
PATRIC	18225834. VBIEscCol82905_1650.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000011081.
HOGENOM	HBG580490.
OMA	YYFCSSA.
ProtClustDB	CLSK880290.
Family and domain databases
InterPro	IPR002053. Glyco_hydro_25. IPR008270. Glyco_hydro_25_AS. IPR018077. Glyco_hydro_fam25_subgr. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K07273.
Pfam	PF01183. Glyco_hydro_25. 1 hit. [Graphical view]
SMART	SM00641. Glyco_25. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00953. GLYCOSYL_HYDROL_F25. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1IYX9_ECOLC

Accession

Primary (citable) accession number: B1IYX9

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)