B1IX36 (RL34_ECOLC) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L34

Gene names

Name:	rpmH
Ordered Locus Names:	EcolC_4292

Organism

Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) [Complete proteome] [HAMAP]

Taxonomic identifier

481805 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli › Escherichia coli C

Protein attributes

Sequence length	46 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L34P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 46	46	50S ribosomal protein L34 HAMAP-Rule MF_00391		PRO_1000080250

Sequences

	Sequence		Length	Mass (Da)
	B1IX36 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 600916E398939412	FASTA	46	5,380
	10 20 30 40 MKRTFQPSVL KRNRSHGFRA RMATKNGRQV LARRRAKGRA RLTVSK

References

[1]

"Complete sequence of Escherichia coli C str. ATCC 8739." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Mikhailova N., Ingram L., Richardson P. Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 8739 / DSM 1576 / Crooks.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000946 Genomic DNA. Translation: ACA79888.1.
RefSeq	YP_001727215.1. NC_010468.1.
3D structure databases
ProteinModelPortal	B1IX36.
SMR	B1IX36. Positions 1-46.
ModBase	Search...
Protein-protein interaction databases
STRING	481805.EcolC_4292.
Proteomic databases
PRIDE	B1IX36.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACA79888; ACA79888; EcolC_4292.
GeneID	6068132.
KEGG	ecl:EcolC_4292.
PATRIC	18231877. VBIEscCol82905_4597.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0230.
HOGENOM	HOG000111572.
KO	K02914.
ProtClustDB	PRK00399.
Enzyme and pathway databases
BioCyc	ECOL481805:GI3G-4408-MONOMER.
Family and domain databases
HAMAP	MF_00391. Ribosomal_L34.
InterPro	IPR000271. Ribosomal_L34. IPR020939. Ribosomal_L34_CS. [Graphical view]
PANTHER	PTHR14503. PTHR14503. 1 hit.
Pfam	PF00468. Ribosomal_L34. 1 hit. [Graphical view]
ProDom	PD003101. Ribosomal_L34. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR01030. rpmH_bact. 1 hit.
PROSITE	PS00784. RIBOSOMAL_L34. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL34_ECOLC

Accession

Primary (citable) accession number: B1IX36

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 20, 2008
Last sequence update:	April 29, 2008
Last modified:	May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program