B1ISA1 (B1ISA1_ECOLC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GntR domain protein EMBL ACA79349.1

Gene names

Ordered Locus Names:

EcolC_3740

Organism

Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) [Complete proteome] [HAMAP] EMBL ACA79349.1

Taxonomic identifier

481805 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	257 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1ISA1 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: FA9A64922E5F5F5A	FASTA	257	29,308
	10 20 30 40 50 60 MKSATSAQRP YQEVGAMIRD LIIKTPYNPG ERLPPEREIA EMLDVTRTVV REALIMLEIK 70 80 90 100 110 120 GLVEVRRGAG IYVLDNSGSQ NTDSPDANVC NDAGPFELLQ ARQLLESNIA EFAALQATRE 130 140 150 160 170 180 DIVKMRQALQ LEERELASSA PGSSESGDMQ FHLAIAEATH NSMLVELFRQ SWQWRENNPM 190 200 210 220 230 240 WIQLHSHLDD SLYRKEWLGD HKQILAALIK KDARAAKLAM WQHLENVKQR LLEFSNVDDI 250 YFDGYLFDSW PLDKVDA

References

[1]

"Complete sequence of Escherichia coli C str. ATCC 8739." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Mikhailova N., Ingram L., Richardson P. Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000946 Genomic DNA. Translation: ACA79349.1.
RefSeq	YP_001726676.1. NC_010468.1.
3D structure databases
ProteinModelPortal	B1ISA1.
SMR	B1ISA1. Positions 9-234.
ModBase	Search...
Protein-protein interaction databases
STRING	B1ISA1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000009502; EBESCP00000009186; EBESCG00000008565.
GeneID	6068618.
GenomeReviews	Gene locus EcolC_3740 in contig CP000946_GR.
KEGG	ecl:EcolC_3740.
PATRIC	18230620. VBIEscCol82905_4001.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000009602.
HOGENOM	HBG700007.
OMA	ENIVNRT.
ProtClustDB	PRK10225.
Family and domain databases
InterPro	IPR011711. GntR_C. IPR000524. Tscrpt_reg_HTH_GntR. IPR011991. WHTH_trsnscrt_rep_DNA-bd. [Graphical view]
Gene3D	G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
KO	K13637.
Pfam	PF07729. FCD. 1 hit. PF00392. GntR. 1 hit. [Graphical view]
PRINTS	PR00035. HTHGNTR.
SMART	SM00895. FCD. 1 hit. SM00345. HTH_GNTR. 1 hit. [Graphical view]
PROSITE	PS50949. HTH_GNTR. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1ISA1_ECOLC

Accession

Primary (citable) accession number: B1ISA1

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	January 25, 2012
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)