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B1IRN7 (B1IRN7_ECOLC) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative isomerase EMBL ACA76296.1
Gene names
Ordered Locus Names:EcolC_0620
OrganismEscherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) [Complete proteome] [HAMAP] EMBL ACA76296.1
Taxonomic identifier481805 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length783 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ACA76296.1
   Molecular functionIsomerase EMBL ACA76296.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtrehalose metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionalpha,alpha-trehalase activity

Inferred from electronic annotation. Source: InterPro

isomerase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential EMBL ACA76296.1
Chain24 – 783760 Potential EMBL ACA76296.1
PRO_5000313831

Sequences

Sequence LengthMass (Da)Tools
B1IRN7 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: AE4C2F1CB78EC82B

FASTA78388,305
        10         20         30         40         50         60 
MKIKTILTPV TCALLISFSA HAANADNYKN VINRTGAPQY MKDYDYDDHQ RFNPFFDLGA 

        70         80         90        100        110        120 
WHGHLLPDGP NTMGGFPGVA LLTEEYINFM ASNFDRLTVW QDGKKVDFTL EAYSIPGALV 

       130        140        150        160        170        180 
QKLTAKDVQV EMTLRFATPR TSLLETKITS NKPLDLVWDG ELLEKLEAKE GKPLSDKTIA 

       190        200        210        220        230        240 
GEYPDYQRKI SATRDGLKVT FGKVRATWDL LTSGESEYQV HKSLPVQTEI NGNRFTSKAH 

       250        260        270        280        290        300 
INGSTTLYTT YSHLLTAQEV SKEQMQIRDI LARPAFYLTA SQQRWEEYLK KGLTNPDATP 

       310        320        330        340        350        360 
EQTRVAVKAI ETLNGNWRSP GGAVKFNTVT PSVTGRWFSG NQTWPWDTWK QAFAMAHFNP 

       370        380        390        400        410        420 
DIAKENIRAV FSWQIQPGDS VRPQDVGFVP DLIAWNLSPE RGGDGGNWNE RNTKPSLAAW 

       430        440        450        460        470        480 
SVMEVYNVTQ DKTWVAEMYP KLVAYHDWWL RNRDHNGNGV PEYGATRDKA HNTESGEMLF 

       490        500        510        520        530        540 
TVKKGDKEET QSGLNNYARV VEKGQYDSLE IPAQVAASWE SGRDDAAVFG FIDKEQLDKY 

       550        560        570        580        590        600 
VANGGKRSDW TVKFAENRSQ DGTLLGYSLL QESVDQASYM YSDNHYLAEM ATILGKPEEA 

       610        620        630        640        650        660 
KRYRQLAQQL ADYINTCMFD PTTQFYYDVR IEDKPLANGC AGKPIVERGK GPEGWSPLFN 

       670        680        690        700        710        720 
GAATQANADA VVKVMLDPKE FNTFVPLGTA ALTNPAFGAD IYWRGRVWVD QFWFGLKGME 

       730        740        750        760        770        780 
RYGYRDDALK LADTFFRHAK GLTADGPIQE NYNPLTGAQQ GAPNFSWSAA HLFMLYNDFF 


RKQ

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References

[1]"Complete sequence of Escherichia coli C str. ATCC 8739."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Ingram L., Richardson P.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000946 Genomic DNA. Translation: ACA76296.1.
RefSeqYP_001723623.1. NC_010468.1.

3D structure databases

ProteinModelPortalB1IRN7.
SMRB1IRN7. Positions 25-782.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1IRN7.

Protein family/group databases

CAZyGH63. Glycoside Hydrolase Family 63.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000005708; EBESCP00000005392; EBESCG00000004771.
GeneID6064679.
GenomeReviewsGene locus EcolC_0620 in contig CP000946_GR.
KEGGecl:EcolC_0620.
PATRIC18223796. VBIEscCol82905_0656.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000010499.
HOGENOMHBG467323.
OMAVAVKAME.
ProtClustDBPRK10137.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR001661. Glyco_hydro_37.
[Graphical view]
KOK03931.
PfamPF01204. Trehalase. 1 hit.
[Graphical view]
SUPFAMSSF48208. Glyco_trans_6hp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1IRN7_ECOLC
AccessionPrimary (citable) accession number: B1IRN7
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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