B1IMH4 (B1IMH4_CLOBK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polysaccharide deacetylase family protein EMBL ACA45077.1

Gene names

Ordered Locus Names:

CLD_1449

Organism

Clostridium botulinum (strain Okra / Type B1) [Complete proteome] [HAMAP]

Taxonomic identifier

498213 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	324 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1IMH4 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 2D9915EF24CA930D	FASTA	324	37,188
	10 20 30 40 50 60 MNKKVISCVL ASSFLLCSCN LSTSNQKFNA SLDESNKKVE ENNIKDKSKD TGTQIKNNIN 70 80 90 100 110 120 DENNTKNEKD EKKDTTTSSN INKFKDESNM SSKEKDWFFK PSKNNEPATI PEDMENDLNK 130 140 150 160 170 180 YSGYFLGDTS KKHLYLTFDE GYENGYTGKI LDTLKENKVK AAFFVTAPYI KQNKDLIKRM 190 200 210 220 230 240 IDEGHLVCNH SDHHPSMASA ALKGKESFKK EFTVVEDLYK DITKKDMPKF FRPPMGKYSE 250 260 270 280 290 300 LSLKYTEDLG YKSIFWSFAY HDWDRNKQPS PEKGKEKILN GVHNGSIILL HAVSKTNTEI 310 320 LDSVLKELKN NGYEFKTLED LPKK

References

[1]

"Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within plasmids." Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C., Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S. PLoS ONE 2:E1271-E1271(2007) [PubMed: 18060065] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000939 Genomic DNA. Translation: ACA45077.1.
RefSeq	YP_001782726.1. NC_010516.1.
3D structure databases
ProteinModelPortal	B1IMH4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6150998.
GenomeReviews	Gene locus CLD_1449 in contig CP000939_GR.
KEGG	cbb:CLD_1449.
PATRIC	19406614. VBICloBot127283_3208.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG751163.
OMA	RPPRGIF.
ProtClustDB	CLSK912296.
Family and domain databases
InterPro	IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR002509. Polysac_deacetylase. IPR014235. Spore_PdaA. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 1 hit.
Pfam	PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
TIGRFAMs	TIGR02884. Spore_pdaA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B1IMH4_CLOBK

Accession

Primary (citable) accession number: B1IMH4

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)