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Protein

Probable chemoreceptor glutamine deamidase CheD

Gene

cheD

Organism
Clostridium botulinum (strain Okra / Type B1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis.UniRule annotation

Catalytic activityi

Protein L-glutamine + H2O = protein L-glutamate + NH3.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Chemotaxis

Names & Taxonomyi

Protein namesi
Recommended name:
Probable chemoreceptor glutamine deamidase CheDUniRule annotation (EC:3.5.1.44UniRule annotation)
Gene namesi
Name:cheDUniRule annotation
Ordered Locus Names:CLD_1823
OrganismiClostridium botulinum (strain Okra / Type B1)
Taxonomic identifieri498213 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
Proteomesi
  • UP000008541 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001458891 – 162Probable chemoreceptor glutamine deamidase CheDAdd BLAST162

Structurei

3D structure databases

ProteinModelPortaliB1IKG3.
SMRiB1IKG3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the CheD family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000273195.
KOiK03411.
OMAiIGMIHIM.

Family and domain databases

HAMAPiMF_01440. CheD. 1 hit.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.

Sequencei

Sequence statusi: Complete.

B1IKG3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDIKEIKVGI ADLNVGKNPD KIITVGLGSC IGIALYDGIK CIGGLSHIML
60 70 80 90 100
PDSTQFSKVT NPMKFADLAI PILVEKMEKL GARKNGLKAK ICGGASMFNF
110 120 130 140 150
SDKSMVMDIG NRNGKAVKEK LKELSIPLLA EDIGGNKGRT MIFDTSTGKV
160
YIKTVGLGTK EI
Length:162
Mass (Da):17,318
Last modified:April 29, 2008 - v1
Checksum:i4B80D8090B8B68CF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000939 Genomic DNA. Translation: ACA46655.1.
RefSeqiWP_003359122.1. NC_010516.1.

Genome annotation databases

EnsemblBacteriaiACA46655; ACA46655; CLD_1823.
KEGGicbb:CLD_1823.
PATRICi19405868. VBICloBot127283_2838.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000939 Genomic DNA. Translation: ACA46655.1.
RefSeqiWP_003359122.1. NC_010516.1.

3D structure databases

ProteinModelPortaliB1IKG3.
SMRiB1IKG3.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACA46655; ACA46655; CLD_1823.
KEGGicbb:CLD_1823.
PATRICi19405868. VBICloBot127283_2838.

Phylogenomic databases

HOGENOMiHOG000273195.
KOiK03411.
OMAiIGMIHIM.

Family and domain databases

HAMAPiMF_01440. CheD. 1 hit.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiCHED_CLOBK
AccessioniPrimary (citable) accession number: B1IKG3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 29, 2008
Last modified: November 2, 2016
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.