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Protein

Superoxide dismutase

Gene

sodA

Organism
Clostridium botulinum (strain Okra / Type B1)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi27Divalent metal cationUniRule annotation1
Metal bindingi75Divalent metal cationUniRule annotation1
Metal bindingi159Divalent metal cationUniRule annotation1
Metal bindingi163Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotationImported
LigandMetal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
Ordered Locus Names:CLD_2296Imported
OrganismiClostridium botulinum (strain Okra / Type B1)Imported
Taxonomic identifieri498213 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
Proteomesi
  • UP000008541 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliB1IHJ9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 83Sod_Fe_NInterPro annotationAdd BLAST81
Domaini90 – 192Sod_Fe_CInterPro annotationAdd BLAST103

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili32 – 52Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

HOGENOMiHOG000013583
KOiK04564
OMAiYLHSIFW

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

B1IHJ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHTLPNLNY DYNALEPHYD EQTLKIHHDI HHKAYVDGLN KAEQKLQQAR
60 70 80 90 100
ESGDFALIKH WEKEIAFHGS GHILHTLFWE NMAPNGNLNP EGSAIERIKQ
110 120 130 140 150
DFGDYEKFKK QFTEAAIAVE GSGWTILAWN PMFQKLVILQ AEKHQNLTQW
160 170 180 190
GVVPLLILDL WEHAYYLKYQ NRRAEFINAW WNIVNWDIVN TRYDNAIK
Length:198
Mass (Da):23,307
Last modified:April 29, 2008 - v1
Checksum:i6129E0D734DFE368
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000939 Genomic DNA Translation: ACA46025.1
RefSeqiWP_003400708.1, NC_010516.1

Genome annotation databases

EnsemblBacteriaiACA46025; ACA46025; CLD_2296
KEGGicbb:CLD_2296

Similar proteinsi

Entry informationi

Entry nameiB1IHJ9_CLOBK
AccessioniPrimary (citable) accession number: B1IHJ9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: March 28, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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